RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 NNTQ13423 1086 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 PKN1Q16512 942 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 TCP11X2Q5H9J9 407 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 EARS2Q5JPH6 523 aaKnown RBP15.42■□□□□ 0.06
SDC1-202ENST00000381150 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 MLXIPQ9HAP2 919 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 FAM184BQ9ULE4 1060 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 V9GY48 417 aaPredicted RBP15.42■□□□□ 0.06
SDC1-202ENST00000381150 THSD7AQ9UPZ6 1657 aa15.42■□□□□ 0.06
SDC1-202ENST00000381150 CCDC196A0A1B0GTZ2 297 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 PPP2R5AQ15172 486 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 TYW1BQ6NUM6 668 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 NFRKBQ6P4R8 1299 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 CCDC42Q96M95 316 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 CCDC43Q96MW1 224 aaKnown RBP15.41■□□□□ 0.06
SDC1-202ENST00000381150 ZSCAN10Q96SZ4 725 aaPredicted RBP15.41■□□□□ 0.06
SDC1-202ENST00000381150 VIPAS39Q9H9C1 493 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 GOLGA6L7A0A1B0GV03 622 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 CYLC1P35663 651 aaPredicted RBP15.41■□□□□ 0.06
SDC1-202ENST00000381150 KRT83P78385 493 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 HLTFQ14527 1009 aaKnown RBP eCLIP15.41■□□□□ 0.06
SDC1-202ENST00000381150 IQCEQ6IPM2 695 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 CCDC24Q8N4L8 307 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.41■□□□□ 0.06
SDC1-202ENST00000381150 LY75O60449 1722 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 BUB1O43683 1085 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 MOCS3O95396 460 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 AARSP49588 968 aaKnown RBP eCLIP15.41■□□□□ 0.06
SDC1-202ENST00000381150 TROAPQ12815 778 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 PPP2R5BQ15173 497 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 CFAP58Q5T655 872 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 TSEN2Q8NCE0 465 aaKnown RBP15.41■□□□□ 0.06
SDC1-202ENST00000381150 ARHGEF1Q92888 912 aaKnown RBP15.41■□□□□ 0.06
SDC1-202ENST00000381150 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
SDC1-202ENST00000381150 TNRC6CQ9HCJ0 1690 aaKnown RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 ZSCAN5CA6NGD5 496 aaPredicted RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 WNT7AO00755 349 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 PARP1P09874 1014 aaKnown RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 XBP1P17861 261 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 MTIF2P46199 727 aaKnown RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 HERVK_113P62684 666 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 PTGDRQ13258 359 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 NBPF5PQ86XG9 351 aaPredicted RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 RNF26Q9BY78 433 aaPredicted RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 TFCP2L1Q9NZI6 479 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 AKR1B10O60218 316 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 NEBLO76041 1014 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 HIBADHP31937 336 aaKnown RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 TBC1D8BQ0IIM8 1120 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 SF3B2Q13435 895 aaKnown RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 C8orf74Q6P047 294 aa15.4■□□□□ 0.06
SDC1-202ENST00000381150 ELOA2Q8IYF1 753 aaPredicted RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 PROCA1Q8NCQ7 364 aaPredicted RBP15.4■□□□□ 0.06
SDC1-202ENST00000381150 KIAA1551Q9HCM1 1747 aa15.39■□□□□ 0.06
SDC1-202ENST00000381150 USP17L12C9JPN9 530 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 USP17L21D6R901 530 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 GNPATO15228 680 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 PLEKP08567 350 aaPredicted RBP15.39■□□□□ 0.05
SDC1-202ENST00000381150 PCP11498 1178 aaKnown RBP15.39■□□□□ 0.05
SDC1-202ENST00000381150 PAFAH1B1P43034 410 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 B4GALNT4Q76KP1 1039 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 NFU1Q9UMS0 254 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 CCDC88AQ3V6T2 1871 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 PRDX5P30044 214 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 CDKAL1Q5VV42 579 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 TPTE2Q6XPS3 522 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 PIK3AP1Q6ZUJ8 805 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 SLC51AQ86UW1 340 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 MS4A14Q96JA4 679 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 ANKRD2Q9GZV1 360 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 NHEJ1Q9H9Q4 299 aaPredicted RBP15.39■□□□□ 0.05
SDC1-202ENST00000381150 DCP1AQ9NPI6 582 aaPredicted RBP15.39■□□□□ 0.05
SDC1-202ENST00000381150 FAM207AQ9NSI2 230 aaPredicted RBP15.39■□□□□ 0.05
SDC1-202ENST00000381150 LAMB1P07942 1786 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 PRCPP42785 496 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 CEP85LQ5SZL2 805 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 FAM182BQ5T319 152 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 GSDMAQ96QA5 445 aa15.39■□□□□ 0.05
SDC1-202ENST00000381150 GUCY2DQ02846 1103 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 SPAG1Q07617 926 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 RPAINQ86UA6 219 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 RNPC3Q96LT9 517 aaKnown RBP15.38■□□□□ 0.05
SDC1-202ENST00000381150 MAST2Q6P0Q8 1798 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 PRPF3O43395 683 aaKnown RBP15.38■□□□□ 0.05
SDC1-202ENST00000381150 ORC4O43929 436 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 PBX1P40424 430 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 C2CD5Q86YS7 1000 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 TBC1D31Q96DN5 1066 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 PHF20Q9BVI0 1012 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 ODF2LQ9ULJ1 636 aa15.38■□□□□ 0.05
SDC1-202ENST00000381150 GOLGA8KD6RF30 607 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 PLEKHA8P1O95397 391 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 VAV2P52735 878 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 NPY5RQ15761 445 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 TTMPQ5BVD1 217 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 NT5DC1Q5TFE4 455 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
SDC1-202ENST00000381150 ZIM3Q96PE6 472 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms