RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 NOC4LQ9BVI4 516 aaKnown RBP27.21■■□□□ 1.95
U2AF1-202ENST00000380276 SEZ6LQ9BYH1 1024 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 WDR11Q9BZH6 1224 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 PRDM6Q9NQX0 595 aa27.21■■□□□ 1.95
U2AF1-202ENST00000380276 A0A0D9SFI3 127 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 ZBBXA8MT70 800 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 FGAP02671 866 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 RRP1P56182 461 aaKnown RBP27.2■■□□□ 1.94
U2AF1-202ENST00000380276 ALX1Q15699 326 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 DUSP28Q4G0W2 176 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 OR6J1Q8NGC5 347 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 SCLYQ96I15 445 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 SLC28A3Q9HAS3 691 aa27.2■■□□□ 1.94
U2AF1-202ENST00000380276 GPHNQ9NQX3 736 aaPredicted RBP27.2■■□□□ 1.94
U2AF1-202ENST00000380276 TRIM6-TRIM34B2RNG4 842 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 NOVP48745 357 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 PDE1AP54750 535 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 TJAP1Q5JTD0 557 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 BTNL9Q6UXG8 535 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 RPUSD2Q8IZ73 545 aaKnown RBP27.19■■□□□ 1.94
U2AF1-202ENST00000380276 MORC4Q8TE76 937 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 CRBNQ96SW2 442 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 WNT8AQ9H1J5 351 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 POLR3EQ9NVU0 708 aa27.19■■□□□ 1.94
U2AF1-202ENST00000380276 CPT1AP50416 773 aa27.18■■□□□ 1.94
U2AF1-202ENST00000380276 PDE4DQ08499 809 aa27.18■■□□□ 1.94
U2AF1-202ENST00000380276 CCDC85BQ15834 202 aaPredicted RBP27.18■■□□□ 1.94
U2AF1-202ENST00000380276 FAM47CQ5HY64 1035 aa27.18■■□□□ 1.94
U2AF1-202ENST00000380276 RNF207Q6ZRF8 634 aa27.18■■□□□ 1.94
U2AF1-202ENST00000380276 MPHOSPH6Q99547 160 aaKnown RBP27.18■■□□□ 1.94
U2AF1-202ENST00000380276 ALDH8A1Q9H2A2 487 aaPredicted RBP27.18■■□□□ 1.94
U2AF1-202ENST00000380276 FGRP09769 529 aa27.17■■□□□ 1.94
U2AF1-202ENST00000380276 PDHBP11177 359 aa27.17■■□□□ 1.94
U2AF1-202ENST00000380276 CYP2C9P11712 490 aa27.17■■□□□ 1.94
U2AF1-202ENST00000380276 NMIQ13287 307 aaPredicted RBP27.17■■□□□ 1.94
U2AF1-202ENST00000380276 RILPL2Q969X0 211 aa27.17■■□□□ 1.94
U2AF1-202ENST00000380276 TRMT13Q9NUP7 481 aaKnown RBP27.17■■□□□ 1.94
U2AF1-202ENST00000380276 SLC4A7Q9Y6M7 1214 aa27.17■■□□□ 1.94
U2AF1-202ENST00000380276 GBF1Q92538 1859 aa27.17■■□□□ 1.94
U2AF1-202ENST00000380276 HSPD1P10809 573 aaKnown RBP27.16■■□□□ 1.94
U2AF1-202ENST00000380276 RABGGTBP53611 331 aa27.16■■□□□ 1.94
U2AF1-202ENST00000380276 BRDTQ58F21 947 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-202ENST00000380276 ZNF589Q86UQ0 364 aaPredicted RBP27.16■■□□□ 1.94
U2AF1-202ENST00000380276 TCP11L1Q9NUJ3 509 aa27.16■■□□□ 1.94
U2AF1-202ENST00000380276 YBX2Q9Y2T7 364 aaKnown RBP27.16■■□□□ 1.94
U2AF1-202ENST00000380276 TNKSO95271 1327 aa27.16■■□□□ 1.94
U2AF1-202ENST00000380276 RAD50Q92878 1312 aa27.16■■□□□ 1.94
U2AF1-202ENST00000380276 PRUNE2Q8WUY3 3088 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 SUPT20HL2P0C7V6 817 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 PPP2R5BQ15173 497 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 MFSD6Q6ZSS7 791 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 DEFB128Q7Z7B8 93 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 CLEC4DQ8WXI8 215 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 MTG1Q9BT17 334 aaPredicted RBP27.15■■□□□ 1.94
U2AF1-202ENST00000380276 CCDC171Q6TFL3 1326 aa27.15■■□□□ 1.94
U2AF1-202ENST00000380276 CHMP4BP1P59074 171 aa27.14■■□□□ 1.94
U2AF1-202ENST00000380276 PURAQ00577 322 aaKnown RBP27.14■■□□□ 1.94
U2AF1-202ENST00000380276 USH1GQ495M9 461 aa27.14■■□□□ 1.94
U2AF1-202ENST00000380276 PPP2R2DQ66LE6 453 aa27.14■■□□□ 1.94
U2AF1-202ENST00000380276 PPP1R13LQ8WUF5 828 aa27.14■■□□□ 1.94
U2AF1-202ENST00000380276 THEGQ9P2T0 379 aa27.14■■□□□ 1.94
U2AF1-202ENST00000380276 PNMA2Q9UL42 364 aa27.14■■□□□ 1.94
U2AF1-202ENST00000380276 LOC102724159A0A0B4J2E5 919 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 RPS6P62753 249 aaKnown RBP27.13■■□□□ 1.93
U2AF1-202ENST00000380276 ZNF543Q08ER8 600 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 ADGRE1Q14246 886 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 PWP2Q15269 919 aaKnown RBP27.13■■□□□ 1.93
U2AF1-202ENST00000380276 AKNAD1Q5T1N1 836 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 MICALL1Q8N3F8 863 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 ZKSCAN3Q9BRR0 538 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 LNPKQ9C0E8 428 aa27.13■■□□□ 1.93
U2AF1-202ENST00000380276 GOLGA8HP0CJ92 632 aa27.12■■□□□ 1.93
U2AF1-202ENST00000380276 TBC1D10CQ8IV04 446 aa27.12■■□□□ 1.93
U2AF1-202ENST00000380276 VCANP13611 3396 aa27.12■■□□□ 1.93
U2AF1-202ENST00000380276 ZMYM6O95789 1325 aa27.12■■□□□ 1.93
U2AF1-202ENST00000380276 RBM47A0AV96 593 aaKnown RBP27.11■■□□□ 1.93
U2AF1-202ENST00000380276 MYOGP15173 224 aa27.11■■□□□ 1.93
U2AF1-202ENST00000380276 ATP2A2P16615 1042 aaKnown RBP27.11■■□□□ 1.93
U2AF1-202ENST00000380276 NBPF20Q3BBV1 942 aa27.11■■□□□ 1.93
U2AF1-202ENST00000380276 COPS5Q92905 334 aa27.11■■□□□ 1.93
U2AF1-202ENST00000380276 TTC14Q96N46 770 aa27.11■■□□□ 1.93
U2AF1-202ENST00000380276 RNF41Q9H4P4 317 aaPredicted RBP27.11■■□□□ 1.93
U2AF1-202ENST00000380276 B4DLN1 442 aa27.1■■□□□ 1.93
U2AF1-202ENST00000380276 NKRFO15226 690 aaKnown RBP eCLIP27.1■■□□□ 1.93
U2AF1-202ENST00000380276 MRPL12P52815 198 aaKnown RBP27.1■■□□□ 1.93
U2AF1-202ENST00000380276 HDAC1Q13547 482 aaPredicted RBP27.1■■□□□ 1.93
U2AF1-202ENST00000380276 IL27Q8NEV9 243 aa27.1■■□□□ 1.93
U2AF1-202ENST00000380276 SCFD2Q8WU76 684 aa27.1■■□□□ 1.93
U2AF1-202ENST00000380276 ESR2Q92731 530 aa27.1■■□□□ 1.93
U2AF1-202ENST00000380276 NOD1Q9Y239 953 aa27.1■■□□□ 1.93
U2AF1-202ENST00000380276 WDR19Q8NEZ3 1342 aa27.1■■□□□ 1.93
U2AF1-202ENST00000380276 PFKMP08237 780 aa27.09■■□□□ 1.93
U2AF1-202ENST00000380276 TXNP10599 105 aaKnown RBP27.09■■□□□ 1.93
U2AF1-202ENST00000380276 PCP11498 1178 aaKnown RBP27.09■■□□□ 1.93
U2AF1-202ENST00000380276 MFAP1P55081 439 aaKnown RBP27.09■■□□□ 1.93
U2AF1-202ENST00000380276 TTLL4Q14679 1199 aa27.09■■□□□ 1.93
U2AF1-202ENST00000380276 RETREG2Q8NC44 543 aa27.09■■□□□ 1.93
U2AF1-202ENST00000380276 DNERQ8NFT8 737 aa27.09■■□□□ 1.93
U2AF1-202ENST00000380276 ATXN2LQ8WWM7 1075 aaKnown RBP27.09■■□□□ 1.93
U2AF1-202ENST00000380276 UBA5Q9GZZ9 404 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms