RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 Q9Y3F1 56 aa11.16□□□□□ -0.62
C9orf72-201ENST00000379995 LTBP2Q14767 1821 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 GRXCR1A8MXD5 290 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 SNHG28P0DPA3 235 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 PCP11498 1178 aaKnown RBP11.15□□□□□ -0.62
C9orf72-201ENST00000379995 SDSP20132 328 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 CALML3P27482 149 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 ALDH5A1P51649 535 aaPredicted RBP11.15□□□□□ -0.62
C9orf72-201ENST00000379995 PSMC6P62333 389 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 AAMPQ13685 434 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 GRIN2CQ14957 1233 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 RASIP1Q5U651 963 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 PSRC1Q6PGN9 363 aaPredicted RBP11.15□□□□□ -0.62
C9orf72-201ENST00000379995 SLC30A10Q6XR72 485 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 ZNF365Q70YC5 407 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 CLEC4DQ8WXI8 215 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 WDR11Q9BZH6 1224 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 TRPV6Q9H1D0 765 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 HIPK3Q9H422 1215 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 RWDD1Q9H446 243 aaPredicted RBP11.15□□□□□ -0.62
C9orf72-201ENST00000379995 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
C9orf72-201ENST00000379995 MYH7P12883 1935 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 MYH8P13535 1937 aa11.15□□□□□ -0.62
C9orf72-201ENST00000379995 UNC80Q8N2C7 3258 aa11.15□□□□□ -0.63
C9orf72-201ENST00000379995 VCANP13611 3396 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 CUL9Q8IWT3 2517 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 COL11A1P12107 1806 aaPredicted RBP11.14□□□□□ -0.63
C9orf72-201ENST00000379995 NEDD4P46934 1319 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 UMODL1Q5DID0 1318 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 LOC102724159A0A0B4J2E5 919 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 B4GALT4O60513 344 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 PBX2P40425 430 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 MFAP1P55081 439 aaKnown RBP11.14□□□□□ -0.63
C9orf72-201ENST00000379995 RPS6P62753 249 aaKnown RBP11.14□□□□□ -0.63
C9orf72-201ENST00000379995 PWP2Q15269 919 aaKnown RBP11.14□□□□□ -0.63
C9orf72-201ENST00000379995 RNF207Q6ZRF8 634 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 PLEKHM2Q8IWE5 1019 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 ESR2Q92731 530 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 ZKSCAN3Q9BRR0 538 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 SEZ6LQ9BYH1 1024 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 PBX4Q9BYU1 374 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 ZNF576Q9H609 170 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 IL23AQ9NPF7 189 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 PNMA2Q9UL42 364 aa11.14□□□□□ -0.63
C9orf72-201ENST00000379995 WDR19Q8NEZ3 1342 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 RBM47A0AV96 593 aaKnown RBP11.13□□□□□ -0.63
C9orf72-201ENST00000379995 ZNF213O14771 459 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 IGHDP01880 384 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 GOLGA8HP0CJ92 632 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 CCL23P55773 120 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 NUCB1Q02818 461 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 CWC27Q6UX04 472 aaKnown RBP11.13□□□□□ -0.63
C9orf72-201ENST00000379995 DGKHQ86XP1 1220 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 HERVK_113Q902F9 699 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 YTHDC1Q96MU7 727 aaKnown RBP11.13□□□□□ -0.63
C9orf72-201ENST00000379995 NOC4LQ9BVI4 516 aaKnown RBP11.13□□□□□ -0.63
C9orf72-201ENST00000379995 UBA5Q9GZZ9 404 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 CPVLQ9H3G5 476 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 OSBPL3Q9H4L5 887 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 CXXC1Q9P0U4 656 aaPredicted RBP11.13□□□□□ -0.63
C9orf72-201ENST00000379995 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
C9orf72-201ENST00000379995 KDM4AO75164 1064 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 FGBP02675 491 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 MYL3P08590 195 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 EDNRBP24530 442 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 CPT1AP50416 773 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 PDE4DQ08499 809 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 USH1GQ495M9 461 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 GPATCH4Q5T3I0 446 aaKnown RBP11.12□□□□□ -0.63
C9orf72-201ENST00000379995 OR6J1Q8NGC5 347 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 WNT8AQ9H1J5 351 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 ALDH8A1Q9H2A2 487 aaPredicted RBP11.12□□□□□ -0.63
C9orf72-201ENST00000379995 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 POLR3EQ9NVU0 708 aa11.12□□□□□ -0.63
C9orf72-201ENST00000379995 SPTBN5Q9NRC6 3674 aaKnown RBP11.12□□□□□ -0.63
C9orf72-201ENST00000379995 PRR29P0C7W0 189 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 NT5C2P49902 561 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 PURAQ00577 322 aaKnown RBP11.11□□□□□ -0.63
C9orf72-201ENST00000379995 PPP2R5BQ15173 497 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 CCDC178Q5BJE1 867 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 OTOP2Q7RTS6 562 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 IQCA1Q86XH1 822 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 RGS22Q8NE09 1264 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 DNERQ8NFT8 737 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 EXOC6Q8TAG9 804 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 SCFD2Q8WU76 684 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 ANKS1AQ92625 1134 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 COPS5Q92905 334 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 MPHOSPH6Q99547 160 aaKnown RBP11.11□□□□□ -0.63
C9orf72-201ENST00000379995 MTG1Q9BT17 334 aaPredicted RBP11.11□□□□□ -0.63
C9orf72-201ENST00000379995 MTIF3Q9H2K0 278 aaKnown RBP11.11□□□□□ -0.63
C9orf72-201ENST00000379995 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 GPHNQ9NQX3 736 aaPredicted RBP11.11□□□□□ -0.63
C9orf72-201ENST00000379995 TRMT13Q9NUP7 481 aaKnown RBP11.11□□□□□ -0.63
C9orf72-201ENST00000379995 MSRAQ9UJ68 235 aa11.11□□□□□ -0.63
C9orf72-201ENST00000379995 TNKSO95271 1327 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms