RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 RHOXF2Q9BQY4 288 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 L1RE1Q9UN81 338 aa20.33■□□□□ 0.84
TDP2-202ENST00000378198 ATP2B4P23634 1241 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 TRAPPC3LQ5T215 181 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 KIAA1328Q86T90 577 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 ZSCAN29Q8IWY8 852 aaPredicted RBP20.32■□□□□ 0.84
TDP2-202ENST00000378198 SLF2Q8IX21 1173 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 CNBD1Q8NA66 436 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 ERGIC2Q96RQ1 377 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 MMTAG2Q9BU76 263 aaKnown RBP20.32■□□□□ 0.84
TDP2-202ENST00000378198 NOC4LQ9BVI4 516 aaKnown RBP20.32■□□□□ 0.84
TDP2-202ENST00000378198 ABCB6Q9NP58 842 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 ZCCHC17Q9NP64 241 aaKnown RBP20.32■□□□□ 0.84
TDP2-202ENST00000378198 AGPAT5Q9NUQ2 364 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 CALCOCO1Q9P1Z2 691 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 TRIM10Q9UDY6 481 aa20.32■□□□□ 0.84
TDP2-202ENST00000378198 A0A1W2PQJ5 194 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 EIF3CLB5ME19 914 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 EIF3JO75822 258 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 IL1R1P14778 569 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 GPSM2P81274 684 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 CDK17Q00537 523 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 REXO1Q8N1G1 1221 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 FAM163AQ96GL9 167 aaPredicted RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 PIGSQ96S52 555 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 EIF3CQ99613 913 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 RASSF10A6NK89 507 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 IPO7O95373 1038 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 TFRCP02786 760 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 PAPD7Q5XG87 772 aaKnown RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 SV2BQ7L1I2 683 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 SLC51AQ86UW1 340 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 TXLNBQ8N3L3 684 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 JAKMIP2Q96AA8 810 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 CEP95Q96GE4 821 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 GPR101Q96P66 508 aaPredicted RBP20.31■□□□□ 0.84
TDP2-202ENST00000378198 RIOX1Q9H6W3 641 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 VAT1LQ9HCJ6 419 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 STK17AQ9UEE5 414 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
TDP2-202ENST00000378198 FCER1AP12319 257 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 HOXA7P31268 230 aaPredicted RBP20.3■□□□□ 0.84
TDP2-202ENST00000378198 MIIPQ5JXC2 388 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 FKBP15Q5T1M5 1219 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 NCAPH2Q6IBW4 605 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 WDR93Q6P2C0 686 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 RPGRQ92834 1020 aaKnown RBP20.3■□□□□ 0.84
TDP2-202ENST00000378198 NHEJ1Q9H9Q4 299 aaPredicted RBP20.3■□□□□ 0.84
TDP2-202ENST00000378198 BIN2Q9UBW5 565 aaPredicted RBP20.3■□□□□ 0.84
TDP2-202ENST00000378198 SAR1BQ9Y6B6 198 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 UFL1O94874 794 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 VSNL1P62760 191 aa20.3■□□□□ 0.84
TDP2-202ENST00000378198 PCMTD1Q96MG8 357 aaPredicted RBP20.3■□□□□ 0.84
TDP2-202ENST00000378198 PVALEFA0A1B0GWK0 134 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 FXR2P51116 673 aaKnown RBP eCLIP20.29■□□□□ 0.84
TDP2-202ENST00000378198 RHBDL3P58872 404 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 MCM6Q14566 821 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 CENPPQ6IPU0 288 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 NOA1Q8NC60 698 aaKnown RBP20.29■□□□□ 0.84
TDP2-202ENST00000378198 RPGRIP1Q96KN7 1286 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 MTMR9Q96QG7 549 aa20.29■□□□□ 0.84
TDP2-202ENST00000378198 H3BQF6 201 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 TXKP42681 527 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 TMEM266Q2M3C6 531 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 KIAA0895Q8NCT3 520 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 PSD3Q9NYI0 1048 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 LRWD1Q9UFC0 647 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 GGA1Q9UJY5 639 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 ANO9A1A5B4 782 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 ATP1A1P05023 1023 aaKnown RBP20.28■□□□□ 0.84
TDP2-202ENST00000378198 MCM3P25205 808 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 KLK7P49862 253 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 ST5P78524 1137 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 CKAP4Q07065 602 aaKnown RBP20.28■□□□□ 0.84
TDP2-202ENST00000378198 GRB10Q13322 594 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 CALCRLQ16602 461 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 UNC13DQ70J99 1090 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 CERKQ8TCT0 537 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 TBC1D22AQ8WUA7 517 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 EXOC4Q96A65 974 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 SEMA6BQ9H3T3 888 aa20.28■□□□□ 0.84
TDP2-202ENST00000378198 GAKO14976 1311 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 PLIN4Q96Q06 1357 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 USP17L5A8MUK1 530 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 ENC1O14682 589 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 FGFR1OPO95684 399 aaKnown RBP20.27■□□□□ 0.84
TDP2-202ENST00000378198 NGLY1Q96IV0 654 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 RAB34Q9BZG1 259 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 UBA5Q9GZZ9 404 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 PDE11AQ9HCR9 933 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 BLOC1S4Q9NUP1 217 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 TMEM260Q9NX78 707 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 ABCB11O95342 1321 aa20.27■□□□□ 0.84
TDP2-202ENST00000378198 PDHBP11177 359 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 USP14P54578 494 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 PDIA5Q14554 519 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 ASPRV1Q53RT3 343 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 PRR5LQ6MZQ0 368 aa20.26■□□□□ 0.83
TDP2-202ENST00000378198 CDK5RAP3Q96JB5 506 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms