RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 ARID5AQ03989 594 aa11.06□□□□□ -0.64
RNF38-206ENST00000377885 MAN2A1Q16706 1144 aa11.06□□□□□ -0.64
RNF38-206ENST00000377885 LAMA4Q16363 1823 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 TCRBV5S4A2TA0A5A2 114 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 SHOX2O60902 331 aaPredicted RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 CTNNA1P35221 906 aaKnown RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 RPS6KA1Q15418 735 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 INF2Q27J81 1249 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 SWT1Q5T5J6 900 aaKnown RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 KRT25Q7Z3Z0 450 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 CACNA2D3Q8IZS8 1091 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 LACRTQ9GZZ8 138 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 ZHX3Q9H4I2 956 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 CXorf56Q9H5V9 222 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 CCNT1O60563 726 aaKnown RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 VWA3BQ502W6 1294 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 RNF10Q8N5U6 811 aaKnown RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 CCDC26Q8TAB7 109 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 SPAG5Q96R06 1193 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 MEGF6O75095 1541 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 USP17L12C9JPN9 530 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 USP17L21D6R901 530 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 RHOBTB3O94955 611 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 CDK17Q00537 523 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 RAPGEF1Q13905 1077 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 PFKFB3Q16875 520 aaPredicted RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 SYNE4Q8N205 404 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 RRP36Q96EU6 259 aaKnown RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 NDST4Q9H3R1 872 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 GOPCQ9HD26 462 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 REXO2Q9Y3B8 237 aaKnown RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 OR52Z1P0C646 297 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 FAM47AQ5JRC9 791 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 RPAINQ86UA6 219 aa11.05□□□□□ -0.64
RNF38-206ENST00000377885 ZNF335Q9H4Z2 1342 aaPredicted RBP11.05□□□□□ -0.64
RNF38-206ENST00000377885 PPP1R37O75864 691 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 NONOQ15233 471 aaKnown RBP eCLIP11.04□□□□□ -0.64
RNF38-206ENST00000377885 MEA1Q16626 185 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 KRT26Q7Z3Y9 468 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 NLRP14Q86W24 1093 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 GPKOWQ92917 476 aaPredicted RBP eCLIP11.04□□□□□ -0.64
RNF38-206ENST00000377885 ATP6V1G3Q96LB4 118 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 SH3GLB2Q9NR46 395 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 TRAF5O00463 557 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 TSPY3P0CV98 308 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 TSPY8P0CW00 308 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 EPB41P11171 864 aaKnown RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 DRP2Q13474 957 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 KRT79Q5XKE5 535 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 ARMC9Q7Z3E5 817 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 DZIP1Q86YF9 867 aaKnown RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 GIMAP8Q8ND71 665 aaPredicted RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 ZIM3Q96PE6 472 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 SLC39A2Q9NP94 309 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 SLC8A1P32418 973 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 LSP1P33241 339 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 ASIC2Q16515 512 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 CAVIN3Q969G5 261 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 RSRC1Q96IZ7 334 aaKnown RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 CEP104O60308 925 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 PLCG1P19174 1290 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 SKOR1P84550 965 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 GKAP1Q5VSY0 366 aaPredicted RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 KDM7AQ6ZMT4 941 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 PAXIP1Q6ZW49 1069 aaPredicted RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 SH2D3CQ8N5H7 860 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 NSRP1Q9H0G5 558 aaKnown RBP11.04□□□□□ -0.64
RNF38-206ENST00000377885 STX8Q9UNK0 236 aa11.04□□□□□ -0.64
RNF38-206ENST00000377885 GOLGA6L10A0A0M3HER8 536 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 GRID2IPA4D2P6 1211 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 GUCY1A3Q02108 690 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 KLHL30Q0D2K2 578 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 PKN1Q16512 942 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 ZNF473Q8WTR7 871 aaKnown RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 VEZTQ9HBM0 779 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 DMGDHQ9UI17 866 aaKnown RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 DUSP10Q9Y6W6 482 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 TULP1O00294 542 aaPredicted RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 NCK2O43639 380 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 KIF1CO43896 1103 aaKnown RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 EHHADHQ08426 723 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 RASGRP4Q8TDF6 673 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 ARL8AQ96BM9 186 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 BRIP1Q9BX63 1249 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 MCM9Q9NXL9 1143 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 PLAAQ9Y263 795 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 NID2Q14112 1375 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 MYBL2P10244 700 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 MDH1P40925 334 aaKnown RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 CLNS1AP54105 237 aaKnown RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 FIGNQ5HY92 759 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
RNF38-206ENST00000377885 ERGIC2Q96RQ1 377 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 KLC4Q9NSK0 619 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 ODF2LQ9ULJ1 636 aa11.03□□□□□ -0.64
RNF38-206ENST00000377885 LMTK3Q96Q04 1460 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms