RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 ZKSCAN8Q15776 578 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 CDCA2Q69YH5 1023 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 TYW1BQ6NUM6 668 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 C1orf131Q8NDD1 294 aaKnown RBP17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 FERMT2Q96AC1 680 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 CCDC42Q96M95 316 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 EPB41L4AQ9HCS5 686 aaPredicted RBP17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
CSNK1A1-202ENST00000377843 KLHL33A6NCF5 533 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 CIAO1O76071 339 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 MYO1EQ12965 1108 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 SPA17Q15506 151 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 RCSD1Q6JBY9 416 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 LMBR1Q8WVP7 490 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 HVCN1Q96D96 273 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 SPDL1Q96EA4 605 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 BAIAP2L1Q9UHR4 511 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 NID2Q14112 1375 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 C5orf60A6NFR6 353 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 EEF1GP26641 437 aaKnown RBP17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 PAFAH1B1P43034 410 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 DNM2P50570 870 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 PTGDRQ13258 359 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 PLBD2Q8NHP8 589 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 MTMR8Q96EF0 704 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 SLC52A2Q9HAB3 445 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 EXOC1Q9NV70 894 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 PHF20L1A8MW92 1017 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 H0YGN5 161 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 PEX19P40855 299 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 KLHDC7AQ5VTJ3 777 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 ARMC2Q8NEN0 867 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 NUP133Q8WUM0 1156 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 RAPGEF5Q92565 580 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 TUBGCP2Q9BSJ2 902 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 EBF2Q9HAK2 575 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 SLC39A2Q9NP94 309 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 NFS1Q9Y697 457 aa17.35■□□□□ 0.37
CSNK1A1-202ENST00000377843 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 DCDC2CA8MYV0 355 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 EPHB6O15197 1021 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 DNAJC8O75937 253 aaPredicted RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 DNA2P51530 1060 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 UAP1Q16222 522 aaPredicted RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 CUL5Q93034 780 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 TATDN2Q93075 761 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 CCDC85AQ96PX6 553 aaPredicted RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 PARP4Q9UKK3 1724 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 L3MBTL1Q9Y468 752 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 ARFGEF2Q9Y6D5 1785 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 LRP6O75581 1613 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 PPIP5K2O43314 1243 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 BUB1O43683 1085 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 USO1O60763 962 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 CALRP27797 417 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 HSPA9P38646 679 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 KIF11P52732 1056 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 IFFO1Q0D2I5 559 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 PKN1Q16512 942 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 RRP12Q5JTH9 1297 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 HIBCHQ6NVY1 386 aaPredicted RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 BZW1Q7L1Q6 419 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 CACNA2D3Q8IZS8 1091 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 TRIM47Q96LD4 638 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 KRT12Q99456 494 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 LRRC4CQ9HCJ2 640 aa17.34■□□□□ 0.37
CSNK1A1-202ENST00000377843 ZNF532Q9HCE3 1301 aa17.33■□□□□ 0.37
CSNK1A1-202ENST00000377843 F8W031 263 aaPredicted RBP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 KCNB1Q14721 858 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 TTI2Q6NXR4 508 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 PARD3BQ8TEW8 1205 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 RAPGEF4Q8WZA2 1011 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 HOOK2Q96ED9 719 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 PCMTD1Q96MG8 357 aaPredicted RBP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 UBAC1Q9BSL1 405 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 THAP9Q9H5L6 903 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 HSD17B3P37058 310 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 EIF4A3P38919 411 aaKnown RBP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 ATP2C1P98194 919 aaPredicted RBP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 CDK17Q00537 523 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 SF3A3Q12874 501 aaKnown RBP eCLIP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 FAM43BQ6ZT52 329 aaPredicted RBP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 C2CD5Q86YS7 1000 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 RSRC1Q96IZ7 334 aaKnown RBP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 PHF20Q9BVI0 1012 aa17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.33■□□□□ 0.36
CSNK1A1-202ENST00000377843 BUB1BO60566 1050 aaPredicted RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 IDH1O75874 414 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 ECHS1P30084 290 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 RNASE9P60153 205 aaKnown RBP17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 ZNF844Q08AG5 666 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 NBPF20Q3BBV1 942 aa17.32■□□□□ 0.36
CSNK1A1-202ENST00000377843 MIIPQ5JXC2 388 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms