RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 CENPPQ6IPU0 288 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 RBM17Q96I25 401 aaKnown RBP13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 ERGIC2Q96RQ1 377 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 MYH1P12882 1939 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 A0A1W2PQJ5 194 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 USP17L5A8MUK1 530 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 B4DLN1 442 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 TUBBP07437 444 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 PDIA5Q14554 519 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 LONRF2Q1L5Z9 754 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 MIIPQ5JXC2 388 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 BEND6Q5SZJ8 279 aaPredicted RBP13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 CNNM4Q6P4Q7 775 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 TBC1D16Q8TBP0 767 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 IQCDQ96DY2 449 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 MTMR4Q9NYA4 1195 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 STK17AQ9UEE5 414 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
TNFRSF9-201ENST00000377507 C10orf71Q711Q0 1435 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 FOCADQ5VW36 1801 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 PVALEFA0A1B0GWK0 134 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 GYS1P13807 737 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 HERVK_113P62684 666 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 ASIC1P78348 528 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 KRT83P78385 493 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 ZBED6P86452 979 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 GRB10Q13322 594 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 ASPRV1Q53RT3 343 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 FAM182BQ5T319 152 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 FOXR2Q6PJQ5 311 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 TRAPPC11Q7Z392 1133 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 CCDC170Q8IYT3 715 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 PIAS4Q8N2W9 510 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 KIAA0895Q8NCT3 520 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 CALML4Q96GE6 196 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 LRRC4BQ9NT99 713 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 BLOC1S4Q9NUP1 217 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 USP21Q9UK80 565 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 MYO6Q9UM54 1294 aa13.14□□□□□ -0.31
TNFRSF9-201ENST00000377507 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CTAGE15A4D2H0 777 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CTAGE8P0CG41 777 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 FCER1AP12319 257 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 HNRNPH3P31942 346 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CYP2C19P33261 490 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 TBC1D8BQ0IIM8 1120 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 TSR1Q2NL82 804 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CTAGE6Q86UF2 777 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CTAGE4Q8IX94 777 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CNOT6LQ96LI5 555 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 PNMA5Q96PV4 448 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 CRAMP1Q96RY5 1269 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 PNKPQ96T60 521 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 UBA5Q9GZZ9 404 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 ZSWIM4Q9H7M6 989 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 VAT1LQ9HCJ6 419 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 SUGT1Q9Y2Z0 365 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 ABCB11O95342 1321 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 EIF3CLB5ME19 914 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 SERPINB2P05120 415 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 ST5P78524 1137 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 PAPD7Q5XG87 772 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 SV2BQ7L1I2 683 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 EIF3CQ99613 913 aaKnown RBP13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 TMEM260Q9NX78 707 aa13.13□□□□□ -0.31
TNFRSF9-201ENST00000377507 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 EHHADHQ08426 723 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 CALCRLQ16602 461 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 PPP1R18Q6NYC8 613 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 EHBP1Q8NDI1 1231 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 PURBQ96QR8 312 aaKnown RBP13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 TRIM10Q9UDY6 481 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 LRWD1Q9UFC0 647 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 GUCA1BQ9UMX6 200 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 MYO3BQ8WXR4 1341 aa13.12□□□□□ -0.31
TNFRSF9-201ENST00000377507 MYMKA6NI61 221 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 ONECUT3O60422 494 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 TFRCP02786 760 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 CYLC1P35663 651 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 TXKP42681 527 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 CLK2P49760 499 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 ADCY7P51828 1080 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 PPP4R3AQ6IN85 833 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 WDR93Q6P2C0 686 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 GUF1Q8N442 669 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 NOC4LQ9BVI4 516 aaKnown RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 NHEJ1Q9H9Q4 299 aaPredicted RBP13.11□□□□□ -0.31
TNFRSF9-201ENST00000377507 RIC8AQ9NPQ8 531 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms