RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	USP17L22	D6RA61	530 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	USP17L17	D6RBQ6	530 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	USP17L19	D6RCP7	530 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	USP17L20	D6RJB6	530 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	TAL1	P17542	331 aa	Predicted RBP	13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	USP17L24	Q0WX57	530 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	C9orf131	Q5VYM1	1079 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	DCAF15	Q66K64	600 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	DPY19L2	Q6NUT2	758 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	USP17L6P	Q6QN14	398 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	FCHSD1	Q86WN1	690 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	CPXCR1	Q8N123	301 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	DEF6	Q9H4E7	631 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	FBXO2	Q9UK22	296 aa	Predicted RBP	13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	UBA7	P41226	1012 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	NPY5R	Q15761	445 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	LONRF3	Q496Y0	759 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	NEK8	Q86SG6	692 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	SIAH1	Q8IUQ4	282 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	STAM	Q92783	540 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	AMN	Q9BXJ7	453 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	ZMYND12	Q9H0C1	365 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	SERTAD1	Q9UHV2	236 aa		13.18	□□□□□ -0.3
LMO7-204	ENST00000377499	SMARCA1	P28370	1054 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	INPP5B	P32019	993 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	TRAPPC10	P48553	1259 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	ZNF280A	P59817	542 aa	Predicted RBP	13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	PNOC	Q13519	176 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	DHX8	Q14562	1220 aa	Known RBP	13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	STX1A	Q16623	288 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	EAPP	Q56P03	285 aa	Predicted RBP	13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	ENGASE	Q8NFI3	743 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	SYMPK	Q92797	1274 aa	Known RBP	13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	MKL1	Q969V6	931 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	PDLIM2	Q96JY6	352 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	ANO10	Q9NW15	660 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	GPRC5D	Q9NZD1	345 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	LTBP3	Q9NS15	1303 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	CDK5RAP2	Q96SN8	1893 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	SNHG28	P0DPA3	235 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	TXK	P42681	527 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	RESP18	Q5W5W9	173 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	GPC2	Q8N158	579 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	FERMT2	Q96AC1	680 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	JRKL	Q9Y4A0	524 aa		13.17	□□□□□ -0.3
LMO7-204	ENST00000377499	CFB	P00751	764 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	ZNF76	P36508	570 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	CHURC1	Q8WUH1	139 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	DCPS	Q96C86	337 aa	Known RBP	13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	NAT10	Q9H0A0	1025 aa	Known RBP	13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	SULF1	Q8IWU6	871 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	GRAMD1C	Q8IYS0	662 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	FAM200A	Q8TCP9	573 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	FBXO28	Q9NVF7	368 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	SPDYE3	A6NKU9	549 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	NEMF	O60524	1076 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	SPP2	Q13103	211 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	KRBA2	Q6ZNG9	492 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	KIAA1468	Q9P260	1216 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	CLEC11A	Q9Y240	323 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	MYH8	P13535	1937 aa		13.16	□□□□□ -0.3
LMO7-204	ENST00000377499	HOMER2	Q9NSB8	354 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	LCMT1	Q9UIC8	334 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	DDX41	Q9UJV9	622 aa	Known RBP	13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	PRR12	Q9ULL5	1215 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	TMX2	Q9Y320	296 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	hCG_1984214	I3L0E3	225 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	HOXA13	P31271	388 aa	Predicted RBP	13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	CASQ1	P31415	396 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	NOV	P48745	357 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	DLK2	Q6UY11	383 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	ZNF713	Q8N859	430 aa	Predicted RBP	13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	TNFRSF25	Q93038	417 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	VCPKMT	Q9H867	229 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	MYO1C	O00159	1063 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	GUCY2C	P25092	1073 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	TEC	P42680	631 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	DGKZ	Q13574	1117 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	LRCH2	Q5VUJ6	765 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	GMCL1P1	Q8NEA9	526 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	CDK5RAP3	Q96JB5	506 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	CXorf56	Q9H5V9	222 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	CBX8	Q9HC52	389 aa		13.15	□□□□□ -0.3
LMO7-204	ENST00000377499	PPP1R11	O60927	126 aa	Predicted RBP	13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	FLOT1	O75955	427 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	NCBP1	Q09161	790 aa	Known RBP	13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	GOLGA6L1	Q8N7Z2	621 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	HOOK2	Q96ED9	719 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	GMCL1	Q96IK5	515 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	TRIM5	Q9C035	493 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	ZHX2	Q9Y6X8	837 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	FOXN1	O15353	648 aa		13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	YBX3	P16989	372 aa	Known RBP eCLIP	13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	ATP2C1	P98194	919 aa	Predicted RBP	13.14	□□□□□ -0.31
LMO7-204	ENST00000377499	MTMR2	Q13614	643 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms