RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 KCND1Q9NSA2 647 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 LGALS16A8MUM7 142 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 ECM2O94769 699 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 SEC24CP53992 1094 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 ITPK1Q13572 414 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 ZNF579Q8NAF0 562 aaKnown RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 TBCKQ8TEA7 893 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 ZNF384Q8TF68 577 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 HAUS4Q9H6D7 363 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 BMP2KQ9NSY1 1161 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-202ENST00000375597 MYH8P13535 1937 aa13.11□□□□□ -0.31
MCF2L-202ENST00000375597 MEIS1O00470 390 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 MAP2K7O14733 419 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 TDP2O95551 362 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 IVLP07476 585 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 IL6STP40189 918 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-202ENST00000375597 MINPP1Q9UNW1 487 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 ABCC6O95255 1503 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 KIF11P52732 1056 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 DDB1Q16531 1140 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 NBPF9Q3BBW0 867 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 SNX29Q8TEQ0 813 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 RIOK1Q9BRS2 568 aaKnown RBP13.1□□□□□ -0.31
MCF2L-202ENST00000375597 ADAMTS1Q9UHI8 967 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 KDM4FA0A1W2PPD8 638 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 TLDC2A0PJX2 215 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 H7C1D1 291 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 EBAG9O00559 213 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 NT5DC1Q5TFE4 455 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 FBXL16Q8N461 479 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
MCF2L-202ENST00000375597 RBM12Q9NTZ6 932 aaKnown RBP13.1□□□□□ -0.31
MCF2L-202ENST00000375597 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
MCF2L-202ENST00000375597 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-202ENST00000375597 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 TRIM28Q13263 835 aaKnown RBP13.09□□□□□ -0.31
MCF2L-202ENST00000375597 NPY5RQ15761 445 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 NAALADL2Q58DX5 795 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 ADSSL1Q8N142 457 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 P2RX5Q93086 422 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 HSF2BPO75031 334 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 SYF2O95926 243 aaKnown RBP13.09□□□□□ -0.31
MCF2L-202ENST00000375597 ALX1Q15699 326 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 FAM133AQ8N9E0 248 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 TSEN2Q8NCE0 465 aaKnown RBP13.09□□□□□ -0.31
MCF2L-202ENST00000375597 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 LIMA1Q9UHB6 759 aaKnown RBP13.09□□□□□ -0.31
MCF2L-202ENST00000375597 CAPN7Q9Y6W3 813 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 MYO5AQ9Y4I1 1855 aaKnown RBP13.09□□□□□ -0.31
MCF2L-202ENST00000375597 FAM153BP0C7A2 387 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 COPB2P35606 906 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 CARSP49589 748 aaKnown RBP13.09□□□□□ -0.31
MCF2L-202ENST00000375597 FAM153CQ494X1 144 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 MAEAQ7L5Y9 396 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 CAPS2Q9BXY5 557 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 PACSIN1Q9BY11 444 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 DPH5Q9H2P9 285 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 FAM153AQ9UHL3 310 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 PCDHA13Q9Y5I0 950 aa13.09□□□□□ -0.31
MCF2L-202ENST00000375597 WDR19Q8NEZ3 1342 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 ZNF263O14978 683 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 DNM2P50570 870 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 CYP4A11Q02928 519 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 FUT2Q10981 343 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.32
MCF2L-202ENST00000375597 ALS2CR12Q96Q35 445 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 LSM14BQ9BX40 385 aaKnown RBP13.08□□□□□ -0.32
MCF2L-202ENST00000375597 FRMD3A2A2Y4 597 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 SFI1A8K8P3 1242 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 TMEM110-MUSTN1A8MSY1 372 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 KIAA0754O94854 1291 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 ACTN1P12814 892 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 PBX1P40424 430 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 CKAP4Q07065 602 aaKnown RBP13.08□□□□□ -0.32
MCF2L-202ENST00000375597 TAX1BP1Q86VP1 789 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 RDH13Q8NBN7 331 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 SALL4Q9UJQ4 1053 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
MCF2L-202ENST00000375597 KCNK3O14649 394 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 CYTH3O43739 400 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 CEP104O60308 925 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
MCF2L-202ENST00000375597 LDHBP07195 334 aaKnown RBP13.07□□□□□ -0.32
MCF2L-202ENST00000375597 TRAPPC11Q7Z392 1133 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 NSUN4Q96CB9 384 aaKnown RBP13.07□□□□□ -0.32
MCF2L-202ENST00000375597 PCDHA6Q9UN73 950 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 PCDHA8Q9Y5H6 950 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 SCN11AQ9UI33 1791 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 FAM237AA0A1B0GTK4 181 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 C6orf229H3BNL8 230 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 GNPATO15228 680 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 BMP15O95972 392 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 OR52Z1P0C646 297 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 ABCB4P21439 1286 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 CALML3P27482 149 aa13.07□□□□□ -0.32
MCF2L-202ENST00000375597 RPS8P62241 208 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms