RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 CCT5P48643 541 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 IQCA1Q86XH1 822 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 RPGRIP1Q96KN7 1286 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 DOCK2Q92608 1830 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 MRPS25P82663 173 aaKnown RBP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 NPY5RQ15761 445 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 CCDC70Q6NSX1 233 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 UPF1Q92900 1129 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 DRC1Q96MC2 740 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 PYM1Q9BRP8 204 aaKnown RBP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 KAT14Q9H8E8 782 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 CCNI2Q6ZMN8 369 aaPredicted RBP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
CCDC40-203ENST00000374877 RBM28Q9NW13 759 aaKnown RBP12.38□□□□□ -0.43
CCDC40-203ENST00000374877 DUOX1Q9NRD9 1551 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 MATR3P43243 847 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC40-203ENST00000374877 SND1Q7KZF4 910 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC40-203ENST00000374877 ZNF804AQ7Z570 1209 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 ADGRA1Q86SQ6 560 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 AGPSO00116 658 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 KLK7P49862 253 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 TADA2BQ86TJ2 420 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 ADSSL1Q8N142 457 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 NHEJ1Q9H9Q4 299 aaPredicted RBP12.37□□□□□ -0.43
CCDC40-203ENST00000374877 COL1A1P02452 1464 aaPredicted RBP12.37□□□□□ -0.43
CCDC40-203ENST00000374877 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 A0A1W2PQC6 194 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 PSMA7O14818 248 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 KLRK1P26718 216 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
CCDC40-203ENST00000374877 TROAPQ12815 778 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 TMX4Q9H1E5 349 aaPredicted RBP12.37□□□□□ -0.43
CCDC40-203ENST00000374877 EHD4Q9H223 541 aa12.37□□□□□ -0.43
CCDC40-203ENST00000374877 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 ADAMTS3O15072 1205 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 UFL1O94874 794 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 EEF1GP26641 437 aaKnown RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 TBC1D8BQ0IIM8 1120 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 KIF5AQ12840 1032 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 TTC19Q6DKK2 380 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 IQCEQ6IPM2 695 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 SRBD1Q8N5C6 995 aaKnown RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 SMCR8Q8TEV9 937 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 PDGFDQ9GZP0 370 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 VEGFAP15692 232 aaPredicted RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 LIG3P49916 1009 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 DNM2P50570 870 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 CCDC96Q2M329 555 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 ZNF507Q8TCN5 953 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 SECISBP2LQ93073 1101 aaKnown RBP12.36□□□□□ -0.43
CCDC40-203ENST00000374877 PSMB7Q99436 277 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 CNTNAP5Q8WYK1 1306 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 EBAG9O00559 213 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 IRAK1P51617 712 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 CC2D2BQ6DHV5 1058 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 CSGALNACT2Q8N6G5 542 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 TUBGCP2Q9BSJ2 902 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 EXOC1Q9NV70 894 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 FAM184BQ9ULE4 1060 aa12.36□□□□□ -0.43
CCDC40-203ENST00000374877 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
CCDC40-203ENST00000374877 NMT2O60551 498 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 CALM1P0DP23 149 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 CALM2P0DP24 149 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 CALM3P0DP25 149 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 SCG2P13521 617 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 FKBP15Q5T1M5 1219 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 KRT26Q7Z3Y9 468 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 BCAS4Q8TDM0 211 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
CCDC40-203ENST00000374877 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 DEF6Q9H4E7 631 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 DISC1Q9NRI5 854 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 LRWD1Q9UFC0 647 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 DYNLL1P63167 89 aaKnown RBP12.35□□□□□ -0.43
CCDC40-203ENST00000374877 SLC7A5Q01650 507 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 SPA17Q15506 151 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 CAPS2Q9BXY5 557 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 THAP9Q9H5L6 903 aa12.35□□□□□ -0.43
CCDC40-203ENST00000374877 ANO9A1A5B4 782 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 LONP1P36776 959 aaKnown RBP12.34□□□□□ -0.43
CCDC40-203ENST00000374877 MTIF2P46199 727 aaKnown RBP12.34□□□□□ -0.43
CCDC40-203ENST00000374877 TRAPPC10P48553 1259 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 GNGT1P63211 74 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 MEA1Q16626 185 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 GRIPAP1Q4V328 841 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.43
CCDC40-203ENST00000374877 CCDC42Q96M95 316 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 FAM107BQ9H098 131 aa12.34□□□□□ -0.43
CCDC40-203ENST00000374877 MYH2Q9UKX2 1941 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms