RNA–Protein interactions for RNA: ENST00000374346.7

PTPN20-204, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 2,481 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-204ENST00000374346 AGPAT5Q9NUQ2 364 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 TRIM10Q9UDY6 481 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 JAG2Q9Y219 1238 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 LEMD3Q9Y2U8 911 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 KCNQ2O43526 872 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ATP1A1P05023 1023 aaKnown RBP12.73□□□□□ -0.37
PTPN20-204ENST00000374346 CAPN2P17655 700 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ACTN2P35609 894 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
PTPN20-204ENST00000374346 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
PTPN20-204ENST00000374346 TGFBRAP1Q8WUH2 860 aa12.73□□□□□ -0.37
PTPN20-204ENST00000374346 SECISBP2LQ93073 1101 aaKnown RBP12.73□□□□□ -0.37
PTPN20-204ENST00000374346 DUSP9Q99956 384 aaKnown RBP12.73□□□□□ -0.37
PTPN20-204ENST00000374346 FLT1P17948 1338 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 IDEP14735 1019 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 TMEM266Q2M3C6 531 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 SV2BQ7L1I2 683 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 TRIM58Q8NG06 486 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 JADE2Q9NQC1 790 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 hCG_1984214I3L0E3 225 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
PTPN20-204ENST00000374346 TECP42680 631 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 VAV2P52735 878 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 GYS2P54840 703 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 RC3H1Q5TC82 1133 aaKnown RBP12.72□□□□□ -0.37
PTPN20-204ENST00000374346 FNBP4Q8N3X1 1017 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-204ENST00000374346 ZNF713Q8N859 430 aaPredicted RBP12.72□□□□□ -0.37
PTPN20-204ENST00000374346 CDK5RAP3Q96JB5 506 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 SUGCTQ9HAC7 445 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 COL24A1Q17RW2 1714 aa12.72□□□□□ -0.37
PTPN20-204ENST00000374346 A0A0U1RQG5 324 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-204ENST00000374346 PLCG2P16885 1265 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 TNNT3P45378 269 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-204ENST00000374346 STK4Q13043 487 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 TXNRD3Q86VQ6 643 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 REXO1Q8N1G1 1221 aaKnown RBP12.71□□□□□ -0.37
PTPN20-204ENST00000374346 MMS19Q96T76 1030 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 EYA3Q99504 573 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 DEF6Q9H4E7 631 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 HDAC6Q9UBN7 1215 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 FAN1Q9Y2M0 1017 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 ABCB11O95342 1321 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 TACC1O75410 805 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 RPS6KA4O75676 772 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 GOLGA8HP0CJ92 632 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 RASA1P20936 1047 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 CCDC96Q2M329 555 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 CAPZA3Q96KX2 299 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 ALS2CR12Q96Q35 445 aa12.71□□□□□ -0.37
PTPN20-204ENST00000374346 TULP2O00295 520 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 RUBCNQ92622 972 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 IFIH1Q9BYX4 1025 aaKnown RBP12.7□□□□□ -0.38
PTPN20-204ENST00000374346 PLAGL2Q9UPG8 496 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 ESYT2A0FGR8 921 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 MACROD2A1Z1Q3 448 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 HNRNPH3P31942 346 aaKnown RBP12.7□□□□□ -0.38
PTPN20-204ENST00000374346 AARSP49588 968 aaKnown RBP eCLIP12.7□□□□□ -0.38
PTPN20-204ENST00000374346 LRRC63Q05C16 580 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 VWA3BQ502W6 1294 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 MAPKAPK5Q8IW41 473 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 SLF2Q8IX21 1173 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 NEDD1Q8NHV4 660 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 TBCKQ8TEA7 893 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 PURBQ96QR8 312 aaKnown RBP12.7□□□□□ -0.38
PTPN20-204ENST00000374346 CRACR2AQ9BSW2 395 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 LRWD1Q9UFC0 647 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 IRS2Q9Y4H2 1338 aa12.7□□□□□ -0.38
PTPN20-204ENST00000374346 LRRIQ3A6PVS8 624 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 SRGAP2O75044 1071 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 FCER1AP12319 257 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 CDK8P49336 464 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 CALCRLQ16602 461 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 C16orf86Q6ZW13 317 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 UNC13DQ70J99 1090 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 COG1Q8WTW3 980 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 TSG101Q99816 390 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 LACRTQ9GZZ8 138 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 RTCBQ9Y3I0 505 aaKnown RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 GNPATO15228 680 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 N4BP1O75113 896 aaKnown RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 PRLRP16471 622 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 TXKP42681 527 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 GRAPQ13588 217 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 MAN2A1Q16706 1144 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 SLC35G1Q2M3R5 365 aa12.69□□□□□ -0.38
PTPN20-204ENST00000374346 GRAPLQ8TC17 118 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 LARP4BQ92615 738 aaKnown RBP12.69□□□□□ -0.38
PTPN20-204ENST00000374346 EEF2KMTQ96G04 330 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms