RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 CCDC73Q6ZRK6 1079 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 KRI1Q8N9T8 703 aaKnown RBP11.04□□□□□ -0.64
PTPN20-202ENST00000374339 TBCKQ8TEA7 893 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 MAF1Q9H063 256 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
PTPN20-202ENST00000374339 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
PTPN20-202ENST00000374339 PCDHA7Q9UN72 937 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 AGTPBP1Q9UPW5 1226 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 A0A0G2JMZ2 1700 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 ZNF536O15090 1300 aa11.04□□□□□ -0.64
PTPN20-202ENST00000374339 GCOM1H8Y6P7 765 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 MEIS2O14770 477 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ITGBL1O95965 494 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 POLR2MP0CAP2 368 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 GCFC2P16383 781 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 MCM7P33993 719 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 USP11P51784 963 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 GTF2A2P52657 109 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 IRX3P78415 501 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ATP2C1P98194 919 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ZNF174Q15697 407 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 UBE2SQ16763 222 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 TKFCQ3LXA3 575 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ARL6IP4Q66PJ3 421 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 MRPS27Q92552 414 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ATG4CQ96DT6 458 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 PGBD1Q96JS3 809 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 TMEM260Q9NX78 707 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 SRPRBQ9Y5M8 271 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 OPLAHO14841 1288 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 NEMFO60524 1076 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CFBP00751 764 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CETPP11597 493 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ALAS1P13196 640 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 PTPREP23469 700 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CMA1P23946 247 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 PRPHP41219 470 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 MNX1P50219 401 aaPredicted RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 PTGDRQ13258 359 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 TPRNQ4KMQ1 711 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 TREML2Q5T2D2 321 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CAVIN1Q6NZI2 390 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 USP17L6PQ6QN14 398 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CCAR1Q8IX12 1150 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 CPXCR1Q8N123 301 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 WNK4Q96J92 1243 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 AGBL1Q96MI9 1066 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 TEX13BQ9BXU2 312 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 ANO3Q9BYT9 981 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 RAVER2Q9HCJ3 691 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 DDX19AQ9NUU7 478 aaKnown RBP11.03□□□□□ -0.64
PTPN20-202ENST00000374339 PNMA3Q9UL41 463 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 RABGAP1Q9Y3P9 1069 aa11.03□□□□□ -0.64
PTPN20-202ENST00000374339 MYH7BA7E2Y1 1941 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-202ENST00000374339 OSBPP22059 807 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 HSD17B4P51659 736 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 GHRHRQ02643 423 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 FAM160A1Q05DH4 1040 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 FMR1Q06787 632 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPN20-202ENST00000374339 AXDND1Q5T1B0 1012 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-202ENST00000374339 CCDC183Q5T5S1 534 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 SNRNP48Q6IEG0 339 aaKnown RBP11.02□□□□□ -0.65
PTPN20-202ENST00000374339 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 FSIP1Q8NA03 581 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 REPS2Q8NFH8 660 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 GTF3C2Q8WUA4 911 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-202ENST00000374339 FBXO2Q9UK22 296 aaPredicted RBP11.02□□□□□ -0.65
PTPN20-202ENST00000374339 SLC45A1Q9Y2W3 748 aa11.02□□□□□ -0.65
PTPN20-202ENST00000374339 COPB2P35606 906 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 SREBF1P36956 1147 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 HUNKP57058 714 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 ARHGAP4P98171 946 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 CST9Q5W186 159 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 RESP18Q5W5W9 173 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 SMC1BQ8NDV3 1235 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 TRERF1Q96PN7 1200 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 ASCC2Q9H1I8 757 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-202ENST00000374339 FAM13BQ9NYF5 915 aa11.01□□□□□ -0.65
PTPN20-202ENST00000374339 ZNF214Q9UL59 606 aaPredicted RBP11.01□□□□□ -0.65
PTPN20-202ENST00000374339 SMCHD1A6NHR9 2005 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 CYP3A7-CYP3A51PA0A087WV96 503 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 WNT7AO00755 349 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 KINO60870 393 aaKnown RBP11□□□□□ -0.65
PTPN20-202ENST00000374339 CYP3A4P08684 503 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 OR52Z1P0C646 297 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 CYP3A7P24462 503 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 HOXA13P31271 388 aaPredicted RBP11□□□□□ -0.65
PTPN20-202ENST00000374339 GJA5P36382 358 aa11□□□□□ -0.65
PTPN20-202ENST00000374339 LONP1P36776 959 aaKnown RBP11□□□□□ -0.65
PTPN20-202ENST00000374339 STAT3P40763 770 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms