RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 USP11P51784 963 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 LPAR1Q92633 364 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 FEZ1Q99689 392 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 GGA3Q9NZ52 723 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 PPP2R3BQ9Y5P8 575 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 PIK3CDO00329 1044 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 TECP42680 631 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 ZNF75DP51815 510 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 KIFC2Q96AC6 838 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 MBOAT7Q96N66 472 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 GSDMAQ96QA5 445 aa17.75■□□□□ 0.43
HDAC8-209ENST00000373589 DDX25Q9UHL0 483 aaKnown RBP17.75■□□□□ 0.43
HDAC8-209ENST00000373589 CYP3A7-CYP3A51PA0A087WV96 503 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 SMTNL1A8MU46 457 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 WDR46O15213 610 aaKnown RBP17.74■□□□□ 0.43
HDAC8-209ENST00000373589 FOSP01100 380 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-209ENST00000373589 TAL1P17542 331 aaPredicted RBP17.74■□□□□ 0.43
HDAC8-209ENST00000373589 CYP3A7P24462 503 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 STAT6P42226 847 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 MOXD1Q6UVY6 613 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 MLKLQ8NB16 471 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 FBXO28Q9NVF7 368 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 MYH7BA7E2Y1 1941 aa17.74■□□□□ 0.43
HDAC8-209ENST00000373589 GTPBP6O43824 516 aaPredicted RBP17.73■□□□□ 0.43
HDAC8-209ENST00000373589 DDNO94850 711 aaPredicted RBP17.73■□□□□ 0.43
HDAC8-209ENST00000373589 YBX3P16989 372 aaKnown RBP eCLIP17.73■□□□□ 0.43
HDAC8-209ENST00000373589 CASP1P29466 404 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 TXKP42681 527 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 PDIA5Q14554 519 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 RRAGBQ5VZM2 374 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 CABP7Q86V35 215 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 HAS1Q92839 578 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 MMTAG2Q9BU76 263 aaKnown RBP17.73■□□□□ 0.43
HDAC8-209ENST00000373589 TRIM5Q9C035 493 aa17.73■□□□□ 0.43
HDAC8-209ENST00000373589 ESPNB1AK53 854 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 PRAMEF18Q5VWM3 479 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.72■□□□□ 0.43
HDAC8-209ENST00000373589 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 LRRC15Q8TF66 581 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 WDR18Q9BV38 432 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 RNF181Q9P0P0 153 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 PITPNM2Q9BZ72 1349 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 SREBF1P36956 1147 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 ARHGAP4P98171 946 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 MYL5Q02045 173 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 TMEM266Q2M3C6 531 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 CCDC174Q6PII3 467 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 ZSCAN30Q86W11 494 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 STAMQ92783 540 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 HSD3B7Q9H2F3 369 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 CUEDC2Q9H467 287 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 DACH1Q9UI36 760 aa17.72■□□□□ 0.43
HDAC8-209ENST00000373589 DOCK1Q14185 1865 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 SSC5DA1L4H1 1573 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 SPDYE3A6NKU9 549 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 PTMAP06454 111 aaKnown RBP17.71■□□□□ 0.43
HDAC8-209ENST00000373589 CUL4BQ13620 913 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 CT47A1Q5JQC4 288 aaPredicted RBP17.71■□□□□ 0.43
HDAC8-209ENST00000373589 MRFAP1L1Q96HT8 127 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 WRNIP1Q96S55 665 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 RAB34Q9BZG1 259 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 MAGEF1Q9HAY2 307 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 KCNMB3Q9NPA1 279 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 ADARB2Q9NS39 739 aaKnown RBP17.71■□□□□ 0.43
HDAC8-209ENST00000373589 EMILIN3Q9NT22 766 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 KBTBD4Q9NVX7 518 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 LRWD1Q9UFC0 647 aa17.71■□□□□ 0.43
HDAC8-209ENST00000373589 MYL1P05976 194 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 PTPRAP18433 802 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 PLCG1P19174 1290 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 CDC25BP30305 580 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 MTMR2Q13614 643 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 PRPF38AQ8NAV1 312 aaKnown RBP17.7■□□□□ 0.42
HDAC8-209ENST00000373589 RASSF8Q8NHQ8 419 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 ZKSCAN4Q969J2 545 aaPredicted RBP17.7■□□□□ 0.42
HDAC8-209ENST00000373589 KLRG1Q96E93 195 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 SLF1Q9BQI6 1058 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 BLZF1Q9H2G9 400 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 TTC12Q9H892 705 aaPredicted RBP17.7■□□□□ 0.42
HDAC8-209ENST00000373589 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.7■□□□□ 0.42
HDAC8-209ENST00000373589 MRPL11Q9Y3B7 192 aaKnown RBP17.7■□□□□ 0.42
HDAC8-209ENST00000373589 ZNF536O15090 1300 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 ABCB11O95342 1321 aa17.7■□□□□ 0.42
HDAC8-209ENST00000373589 HOXA13P31271 388 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-209ENST00000373589 CIITAP33076 1130 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 USP14P54578 494 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 TPM4P67936 248 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 Q4G0T1 1027 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 LDHDQ86WU2 507 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 RRAGDQ9NQL2 400 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-209ENST00000373589 SMCHD1A6NHR9 2005 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 ICAM1P05362 532 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 CYP3A4P08684 503 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 VCAM1P19320 739 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 ERCC5P28715 1186 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-209ENST00000373589 LMOD1P29536 600 aaPredicted RBP17.69■□□□□ 0.42
HDAC8-209ENST00000373589 BACE1P56817 501 aa17.69■□□□□ 0.42
HDAC8-209ENST00000373589 FMR1Q06787 632 aaKnown RBP eCLIP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms