RNA–Protein interactions for RNA: ENST00000372616.1

CTPS1-201, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTPS1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-201ENST00000372616 SETQ01105 290 aaPredicted RBP8.09□□□□□ -1.11
CTPS1-201ENST00000372616 PLCB3Q01970 1234 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 KIF23Q02241 960 aaPredicted RBP8.09□□□□□ -1.11
CTPS1-201ENST00000372616 NT5DC1Q5TFE4 455 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TBC1D9BQ66K14 1250 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 C16orf46Q6P387 395 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 VASH1Q7L8A9 365 aaPredicted RBP8.09□□□□□ -1.11
CTPS1-201ENST00000372616 RALYLQ86SE5 291 aaKnown RBP8.09□□□□□ -1.11
CTPS1-201ENST00000372616 NBPF5PQ86XG9 351 aaPredicted RBP8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TC2NQ8N9U0 490 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 EHBP1Q8NDI1 1231 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 NCOA7Q8NI08 942 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 DHX58Q96C10 678 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TRERF1Q96PN7 1200 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 NCAPGQ9BPX3 1015 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 HSD3B7Q9H2F3 369 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 ETNK1Q9HBU6 452 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 PDE11AQ9HCR9 933 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TLR7Q9NYK1 1049 aaKnown RBP8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TFCP2L1Q9NZI6 479 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 LRFN2Q9ULH4 789 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TAF6LQ9Y6J9 622 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 RIC1Q4ADV7 1423 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 ITIH6Q6UXX5 1313 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 QSER1Q2KHR3 1735 aa8.09□□□□□ -1.11
CTPS1-201ENST00000372616 TARSL2A2RTX5 802 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 EIF3CLB5ME19 914 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 ATP1A3P13637 1013 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 ZNF18P17022 549 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 BRD2P25440 801 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 FMR1Q06787 632 aaKnown RBP eCLIP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 TRDNQ13061 729 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 CASP8Q14790 479 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 SF3B3Q15393 1217 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 KIF4BQ2VIQ3 1234 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 GBP6Q6ZN66 633 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 STOX1Q6ZVD7 989 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 TMTC1Q8IUR5 882 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 NLGN1Q8N2Q7 840 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 ANKRD20A12PQ8NF67 263 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 KCTD12Q96CX2 325 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 WDR24Q96S15 920 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 CDC5LQ99459 802 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 EIF3CQ99613 913 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 NAPGQ99747 312 aaPredicted RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 ZCCHC17Q9NP64 241 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 SRP68Q9UHB9 627 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 GOLGA8BA8MQT2 603 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 RNF113AO15541 343 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 PPP1R12BO60237 982 aaPredicted RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 POLR3DP05423 398 aaPredicted RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 HSPD1P10809 573 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 FDPSP14324 419 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 ATP2B1P20020 1258 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 TNNI2P48788 182 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 EPHA4P54764 986 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 CKAP4Q07065 602 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 DSC3Q14574 896 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 SAFBQ15424 915 aaKnown RBP eCLIP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 LDHAL6AQ6ZMR3 332 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 MMS22LQ6ZRQ5 1243 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 RASGRP2Q7LDG7 609 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 KLHDC4Q8TBB5 520 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 AFAP1L1Q8TED9 768 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 FAM163AQ96GL9 167 aaPredicted RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 PYM1Q9BRP8 204 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 GREM2Q9H772 168 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 FANCLQ9NW38 375 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 PCDH10Q9P2E7 1040 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 KCNH3Q9ULD8 1083 aa8.08□□□□□ -1.12
CTPS1-201ENST00000372616 ATXN2Q99700 1313 aaKnown RBP8.08□□□□□ -1.12
CTPS1-201ENST00000372616 LRP5O75197 1615 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 A0A1B0GTH6 734 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 H3BQF6 201 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 GYS1P13807 737 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 IGHMBP2P38935 993 aaKnown RBP8.07□□□□□ -1.12
CTPS1-201ENST00000372616 GUCY1B3Q02153 619 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 SPAG1Q07617 926 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 TFCP2Q12800 502 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 TTC39AQ5SRH9 613 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 THSD4Q6ZMP0 1018 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 BICDL1Q6ZP65 573 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 ATG9AQ7Z3C6 839 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 METTL16Q86W50 562 aaKnown RBP8.07□□□□□ -1.12
CTPS1-201ENST00000372616 TEX2Q8IWB9 1127 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 COL26A1Q96A83 441 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 ANKZF1Q9H8Y5 726 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 CNNM1Q9NRU3 951 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 ZMYM6O95789 1325 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 MROH5Q6ZUA9 1318 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 STK36Q9NRP7 1315 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 CASZ1Q86V15 1759 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 KLF18A0A0U1RQI7 1052 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 TNFRSF10BO14763 440 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 DTNBO60941 627 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 IGHA2P01877 340 aa8.07□□□□□ -1.12
CTPS1-201ENST00000372616 PLCD1P51178 756 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms