RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 ZBED4O75132 1171 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 BCRP11274 1271 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 SMARCA1P28370 1054 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 FUT2Q10981 343 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 TMEM132BQ14DG7 1078 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 SASS6Q6UVJ0 657 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 NOSTRINQ8IVI9 506 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 MB21D1Q8N884 522 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 FAM200AQ8TCP9 573 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 SPZ1Q9BXG8 430 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 RANBP17Q9H2T7 1088 aaKnown RBP18.32■□□□□ 0.52
C9orf78-201ENST00000372447 KCNJ14Q9UNX9 436 aa18.32■□□□□ 0.52
C9orf78-201ENST00000372447 PRPF3O43395 683 aaKnown RBP18.31■□□□□ 0.52
C9orf78-201ENST00000372447 FDX1P10109 184 aa18.31■□□□□ 0.52
C9orf78-201ENST00000372447 DIS3L2Q8IYB7 885 aaKnown RBP18.31■□□□□ 0.52
C9orf78-201ENST00000372447 FMR1NBQ8N0W7 255 aaPredicted RBP18.31■□□□□ 0.52
C9orf78-201ENST00000372447 FOXP1Q9H334 677 aaPredicted RBP18.31■□□□□ 0.52
C9orf78-201ENST00000372447 TSKSQ9UJT2 592 aa18.31■□□□□ 0.52
C9orf78-201ENST00000372447 ZNF214Q9UL59 606 aaPredicted RBP18.31■□□□□ 0.52
C9orf78-201ENST00000372447 BAZ2BQ9UIF8 2168 aaKnown RBP18.31■□□□□ 0.52
C9orf78-201ENST00000372447 ZNF536O15090 1300 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 A0A1B0GVL5 298 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 BTBD18B2RXH4 712 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 PPP6R2O75170 966 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 ERVK-24P63145 666 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 FAM110CQ1W6H9 321 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 CCDC174Q6PII3 467 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 CPXCR1Q8N123 301 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 PIBF1Q8WXW3 757 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 MTMR8Q96EF0 704 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 PIGSQ96S52 555 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 RAVER2Q9HCJ3 691 aaKnown RBP18.3■□□□□ 0.52
C9orf78-201ENST00000372447 MORF4L1Q9UBU8 362 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 USP25Q9UHP3 1055 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 XBP1P17861 261 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 PLS1Q14651 629 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 PTPAQ15257 358 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 CDC37Q16543 378 aaPredicted RBP18.3■□□□□ 0.52
C9orf78-201ENST00000372447 ANO6Q4KMQ2 910 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 AXDND1Q5T1B0 1012 aaPredicted RBP18.3■□□□□ 0.52
C9orf78-201ENST00000372447 HOMER1Q86YM7 354 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 GPRC5AQ8NFJ5 357 aa18.3■□□□□ 0.52
C9orf78-201ENST00000372447 CTDP1Q9Y5B0 961 aaPredicted RBP18.3■□□□□ 0.52
C9orf78-201ENST00000372447 CNTNAP5Q8WYK1 1306 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 ATP2A1O14983 1001 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 NDUFA8P51970 172 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 PKN1Q16512 942 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 QRICH1Q2TAL8 776 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 AGBL1Q96MI9 1066 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 SPATC1LQ9H0A9 340 aa18.29■□□□□ 0.52
C9orf78-201ENST00000372447 hCG_1642624A0A1W2PR95 340 aa18.28■□□□□ 0.52
C9orf78-201ENST00000372447 ZBTB5O15062 677 aa18.28■□□□□ 0.52
C9orf78-201ENST00000372447 CMA1P23946 247 aa18.28■□□□□ 0.52
C9orf78-201ENST00000372447 MARCKSP29966 332 aaPredicted RBP18.28■□□□□ 0.52
C9orf78-201ENST00000372447 STAT3P40763 770 aa18.28■□□□□ 0.52
C9orf78-201ENST00000372447 V9GY48 417 aaPredicted RBP18.28■□□□□ 0.52
C9orf78-201ENST00000372447 GPR25O00155 361 aa18.27■□□□□ 0.52
C9orf78-201ENST00000372447 ICAM1P05362 532 aa18.27■□□□□ 0.52
C9orf78-201ENST00000372447 TAL1P17542 331 aaPredicted RBP18.27■□□□□ 0.52
C9orf78-201ENST00000372447 OAZ1P54368 228 aa18.27■□□□□ 0.52
C9orf78-201ENST00000372447 RRP36Q96EU6 259 aaKnown RBP18.27■□□□□ 0.52
C9orf78-201ENST00000372447 MOV10L1Q9BXT6 1211 aaKnown RBP18.27■□□□□ 0.52
C9orf78-201ENST00000372447 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
C9orf78-201ENST00000372447 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.27■□□□□ 0.52
C9orf78-201ENST00000372447 RIPK3Q9Y572 518 aa18.27■□□□□ 0.52
C9orf78-201ENST00000372447 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
C9orf78-201ENST00000372447 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 PPP1R11O60927 126 aaPredicted RBP18.27■□□□□ 0.51
C9orf78-201ENST00000372447 ADCY5O95622 1261 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 CAVIN2O95810 425 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 RILPL1Q5EBL4 403 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 SNRNP48Q6IEG0 339 aaKnown RBP18.27■□□□□ 0.51
C9orf78-201ENST00000372447 ZSCAN30Q86W11 494 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 PORCNQ9H237 461 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 CBX8Q9HC52 389 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 CCDC39Q9UFE4 941 aa18.27■□□□□ 0.51
C9orf78-201ENST00000372447 COL11A1P12107 1806 aaPredicted RBP18.26■□□□□ 0.51
C9orf78-201ENST00000372447 SP3Q02447 781 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 NR5A1Q13285 461 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 RIOX2Q8IUF8 465 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 SHISA4Q96DD7 197 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 PHF20Q9BVI0 1012 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 VPS54Q9P1Q0 977 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 CCPG1Q9ULG6 757 aa18.26■□□□□ 0.51
C9orf78-201ENST00000372447 FOXN1O15353 648 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 ECM2O94769 699 aaPredicted RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 HSPA1AP0DMV8 641 aaKnown RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 HSPA1BP0DMV9 641 aaKnown RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 PFKFB1P16118 471 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 TOB1P50616 345 aaPredicted RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 CCNA1P78396 465 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 NOM1Q5C9Z4 860 aaKnown RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 FBXO11Q86XK2 927 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 OXER1Q8TDS5 423 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 SDF4Q9BRK5 362 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 EFCC1Q9HA90 598 aa18.25■□□□□ 0.51
C9orf78-201ENST00000372447 SEC63Q9UGP8 760 aaKnown RBP18.25■□□□□ 0.51
C9orf78-201ENST00000372447 ZNF202O95125 648 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms