RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 TTYH3Q9C0H2 523 aa21.4■■□□□ 1.02
TMEM53-202ENST00000372237 LEMD3Q9Y2U8 911 aa21.4■■□□□ 1.02
TMEM53-202ENST00000372237 IPO7O95373 1038 aaKnown RBP21.39■■□□□ 1.02
TMEM53-202ENST00000372237 EHBP1Q8NDI1 1231 aa21.39■■□□□ 1.02
TMEM53-202ENST00000372237 PCMTD1Q96MG8 357 aaPredicted RBP21.39■■□□□ 1.02
TMEM53-202ENST00000372237 HDAC6Q9UBN7 1215 aa21.39■■□□□ 1.02
TMEM53-202ENST00000372237 SAR1BQ9Y6B6 198 aa21.39■■□□□ 1.02
TMEM53-202ENST00000372237 FCER1AP12319 257 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 TECP42680 631 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 MTIF2P46199 727 aaKnown RBP21.39■■□□□ 1.01
TMEM53-202ENST00000372237 AMPD3Q01432 767 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 ZNF804AQ7Z570 1209 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 SLC51AQ86UW1 340 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 MSL3Q8N5Y2 521 aaKnown RBP21.39■■□□□ 1.01
TMEM53-202ENST00000372237 EYA3Q99504 573 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 C7orf25Q9BPX7 421 aa21.39■■□□□ 1.01
TMEM53-202ENST00000372237 SEC63Q9UGP8 760 aaKnown RBP21.39■■□□□ 1.01
TMEM53-202ENST00000372237 ATP1A1P05023 1023 aaKnown RBP21.38■■□□□ 1.01
TMEM53-202ENST00000372237 PPP1R2P41236 205 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 KLK7P49862 253 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 SOGA3Q5TF21 947 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 EXOC4Q96A65 974 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 JAKMIP2Q96AA8 810 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 RRP36Q96EU6 259 aaKnown RBP21.38■■□□□ 1.01
TMEM53-202ENST00000372237 NOC4LQ9BVI4 516 aaKnown RBP21.38■■□□□ 1.01
TMEM53-202ENST00000372237 NHEJ1Q9H9Q4 299 aaPredicted RBP21.38■■□□□ 1.01
TMEM53-202ENST00000372237 CDK8P49336 464 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 ZBED6P86452 979 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 CASP8Q14790 479 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 NFIXQ14938 502 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 USP17L2Q6R6M4 530 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 ZNF662Q6ZS27 426 aa21.38■■□□□ 1.01
TMEM53-202ENST00000372237 TAF1LQ8IZX4 1826 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 WDR93Q6P2C0 686 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 CCDC170Q8IYT3 715 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 CALML4Q96GE6 196 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 RTFDC1Q9BY42 306 aaPredicted RBP21.37■■□□□ 1.01
TMEM53-202ENST00000372237 VAT1LQ9HCJ6 419 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 RASSF10A6NK89 507 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 BTDP43251 543 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 GRAPQ13588 217 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 CNNM4Q6P4Q7 775 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 GRAPLQ8TC17 118 aaPredicted RBP21.37■■□□□ 1.01
TMEM53-202ENST00000372237 TBCKQ8TEA7 893 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 VPS18Q9P253 973 aa21.37■■□□□ 1.01
TMEM53-202ENST00000372237 PAPD7Q5XG87 772 aaKnown RBP21.36■■□□□ 1.01
TMEM53-202ENST00000372237 C16orf86Q6ZW13 317 aa21.36■■□□□ 1.01
TMEM53-202ENST00000372237 ZBTB9Q96C00 473 aa21.36■■□□□ 1.01
TMEM53-202ENST00000372237 GPR101Q96P66 508 aaPredicted RBP21.36■■□□□ 1.01
TMEM53-202ENST00000372237 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
TMEM53-202ENST00000372237 EIF3CLB5ME19 914 aaKnown RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 SRGAP2O75044 1071 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 LMAN1P49257 510 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 MIIPQ5JXC2 388 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 FKBP15Q5T1M5 1219 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 NEDD1Q8NHV4 660 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 MMS19Q96T76 1030 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 EIF3CQ99613 913 aaKnown RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 PSD3Q9NYI0 1048 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 SNED1Q8TER0 1413 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 CERS3Q8IU89 383 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 ZSCAN29Q8IWY8 852 aaPredicted RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 REXO1Q8N1G1 1221 aaKnown RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 PIGSQ96S52 555 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 LACRTQ9GZZ8 138 aa21.35■■□□□ 1.01
TMEM53-202ENST00000372237 RNF216Q9NWF9 866 aaPredicted RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 BIN2Q9UBW5 565 aaPredicted RBP21.35■■□□□ 1.01
TMEM53-202ENST00000372237 RCCD1A6NED2 376 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 ADRA2BP18089 450 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 USP14P54578 494 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 POTEDQ86YR6 584 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 KIAA0895Q8NCT3 520 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 CAPZA3Q96KX2 299 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 ERGIC2Q96RQ1 377 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 MMTAG2Q9BU76 263 aaKnown RBP21.34■■□□□ 1.01
TMEM53-202ENST00000372237 SLC39A2Q9NP94 309 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 N4BP1O75113 896 aaKnown RBP21.34■■□□□ 1.01
TMEM53-202ENST00000372237 TXKP42681 527 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 HSP90B2PQ58FF3 399 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 FIGNQ5HY92 759 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 KRT27Q7Z3Y8 459 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 TEX11Q8IYF3 940 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 HPS3Q969F9 1004 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 CCDC102AQ96A19 550 aa21.34■■□□□ 1.01
TMEM53-202ENST00000372237 CDK5RAP2Q96SN8 1893 aa21.33■■□□□ 1.01
TMEM53-202ENST00000372237 A0A1W2PQJ5 194 aa21.33■■□□□ 1.01
TMEM53-202ENST00000372237 SV2BQ7L1I2 683 aa21.33■■□□□ 1.01
TMEM53-202ENST00000372237 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
TMEM53-202ENST00000372237 RPGRIP1Q96KN7 1286 aa21.33■■□□□ 1.01
TMEM53-202ENST00000372237 ACBD3Q9H3P7 528 aa21.33■■□□□ 1.01
TMEM53-202ENST00000372237 CYP27A1Q02318 531 aa21.33■■□□□ 1
TMEM53-202ENST00000372237 CKAP4Q07065 602 aaKnown RBP21.33■■□□□ 1
TMEM53-202ENST00000372237 ORC2Q13416 577 aaPredicted RBP21.33■■□□□ 1
TMEM53-202ENST00000372237 COBLL1Q53SF7 1204 aa21.33■■□□□ 1
TMEM53-202ENST00000372237 DDX60LQ5H9U9 1706 aaKnown RBP21.32■■□□□ 1
TMEM53-202ENST00000372237 MACROD2A1Z1Q3 448 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 TRIM37O94972 964 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 MCM3P25205 808 aa21.32■■□□□ 1
TMEM53-202ENST00000372237 SMARCA1P28370 1054 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms