RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 DAGLBQ8NCG7 672 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 CCDC47Q96A33 483 aaKnown RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 DUSP9Q99956 384 aaKnown RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 MMTAG2Q9BU76 263 aaKnown RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 NOC4LQ9BVI4 516 aaKnown RBP12.88□□□□□ -0.35
RAB39B-201ENST00000369454 BBOX1O75936 387 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 ADCY7P51828 1080 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 CRY2Q49AN0 593 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 GALNT17Q6IS24 598 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 OR8K1Q8NGG5 319 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 CAPZA3Q96KX2 299 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 LAMB1P07942 1786 aa12.88□□□□□ -0.35
RAB39B-201ENST00000369454 LGALS16A8MUM7 142 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SRGAP2O75044 1071 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SASH3O75995 380 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 NDUFA10O95299 355 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 TAL1P17542 331 aaPredicted RBP12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SAMD1Q6SPF0 538 aaPredicted RBP12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SLF2Q8IX21 1173 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SNX29Q8TEQ0 813 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 P2RX5Q93086 422 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 FAM207AQ9NSI2 230 aaPredicted RBP12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L10C9JJH3 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 KIAA1328Q86T90 577 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 ADGRF4Q8IZF3 695 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 KANSL2Q9H9L4 492 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SUGCTQ9HAC7 445 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SERPINB13Q9UIV8 391 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 MYMKA6NI61 221 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L15C9J2P7 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L13C9JLJ4 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L11C9JVI0 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L18D6R9N7 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L22D6RA61 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L17D6RBQ6 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L19D6RCP7 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L20D6RJB6 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 PLA2G4AP47712 749 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 GYS2P54840 703 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L24Q0WX57 530 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 CCDC122Q5T0U0 273 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 USP17L6PQ6QN14 398 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 KCNK18Q7Z418 384 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAB39B-201ENST00000369454 DUSP10Q9Y6W6 482 aa12.87□□□□□ -0.35
RAB39B-201ENST00000369454 ITIH6Q6UXX5 1313 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 DLEC1Q9Y238 1755 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 TBC1D22AQ8WUA7 517 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 TANGO6Q9C0B7 1094 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 REXO2Q9Y3B8 237 aaKnown RBP12.86□□□□□ -0.35
RAB39B-201ENST00000369454 RGL2O15211 777 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 ARHGAP25P42331 645 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 GRB10Q13322 594 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 KCNB1Q14721 858 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 CC2D1AQ6P1N0 951 aaPredicted RBP12.86□□□□□ -0.35
RAB39B-201ENST00000369454 TMED8Q6PL24 325 aaPredicted RBP12.86□□□□□ -0.35
RAB39B-201ENST00000369454 GPR161Q8N6U8 529 aaKnown RBP12.86□□□□□ -0.35
RAB39B-201ENST00000369454 CCDC51Q96ER9 411 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 NAPGQ99747 312 aaPredicted RBP12.86□□□□□ -0.35
RAB39B-201ENST00000369454 GTPBP4Q9BZE4 634 aaKnown RBP12.86□□□□□ -0.35
RAB39B-201ENST00000369454 POLD4Q9HCU8 107 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 ARFGAP3Q9NP61 516 aa12.86□□□□□ -0.35
RAB39B-201ENST00000369454 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 LAD1O00515 517 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 PPP1R11O60927 126 aaPredicted RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 PLEKP08567 350 aaPredicted RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 IKQ13123 557 aaPredicted RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 KRT26Q7Z3Y9 468 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 CCDC155Q8N6L0 562 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 MMRN2Q9H8L6 949 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 JMJD4Q9H9V9 463 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 CCNE1P24864 410 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 EEF1GP26641 437 aaKnown RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 PRPHP41219 470 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 ENOX2Q16206 610 aaKnown RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 TMEM266Q2M3C6 531 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 LARP4BQ92615 738 aaKnown RBP12.85□□□□□ -0.35
RAB39B-201ENST00000369454 SEMA6BQ9H3T3 888 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 TTLL1O95922 423 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 AMPD3Q01432 767 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 TERF2Q15554 542 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 CERKQ8TCT0 537 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 AK8Q96MA6 479 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 THAP9Q9H5L6 903 aa12.85□□□□□ -0.35
RAB39B-201ENST00000369454 ECM1Q16610 540 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 ZNF507Q8TCN5 953 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 PNKPQ96T60 521 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 BLOC1S4Q9NUP1 217 aa12.84□□□□□ -0.35
RAB39B-201ENST00000369454 ZRANB2O95218 330 aaKnown RBP eCLIP12.84□□□□□ -0.35
RAB39B-201ENST00000369454 TBC1D8O95759 1140 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms