RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 KIAA1211Q6ZU35 1233 aa18.84■□□□□ 0.61
CKS1B-202ENST00000368436 CHD1LQ86WJ1 897 aa18.84■□□□□ 0.61
CKS1B-202ENST00000368436 RNF41Q9H4P4 317 aaPredicted RBP18.84■□□□□ 0.61
CKS1B-202ENST00000368436 WDR19Q8NEZ3 1342 aa18.83■□□□□ 0.61
CKS1B-202ENST00000368436 IGHDP01880 384 aa18.83■□□□□ 0.6
CKS1B-202ENST00000368436 CYP2C18P33260 490 aa18.83■□□□□ 0.6
CKS1B-202ENST00000368436 NT5C2P49902 561 aa18.83■□□□□ 0.6
CKS1B-202ENST00000368436 NUCB1Q02818 461 aa18.83■□□□□ 0.6
CKS1B-202ENST00000368436 MAFAQ8NHW3 353 aaPredicted RBP18.83■□□□□ 0.6
CKS1B-202ENST00000368436 PPP1R12CQ9BZL4 782 aa18.83■□□□□ 0.6
CKS1B-202ENST00000368436 ZNF213O14771 459 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 DNAJB2P25686 324 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 PSRC1Q6PGN9 363 aaPredicted RBP18.82■□□□□ 0.6
CKS1B-202ENST00000368436 SLC30A10Q6XR72 485 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 RNF207Q6ZRF8 634 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 ZNF365Q70YC5 407 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 DGKHQ86XP1 1220 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 ESR2Q92731 530 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 WDR11Q9BZH6 1224 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 A0A0C4DFX4 3053 aa18.82■□□□□ 0.6
CKS1B-202ENST00000368436 CUL9Q8IWT3 2517 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 NEDD4P46934 1319 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 UNC80Q8N2C7 3258 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 PTPDC1A2A3K4 754 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 ACRP10323 421 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 PSMC6P62333 389 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 GPATCH4Q5T3I0 446 aaKnown RBP18.81■□□□□ 0.6
CKS1B-202ENST00000368436 ANKS1AQ92625 1134 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 COL25A1Q9BXS0 654 aaPredicted RBP18.81■□□□□ 0.6
CKS1B-202ENST00000368436 IL23AQ9NPF7 189 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 CDH23Q9H251 3354 aa18.81■□□□□ 0.6
CKS1B-202ENST00000368436 B4GALT4O60513 344 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 FOSL2P15408 326 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 EDNRBP24530 442 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 CALML3P27482 149 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 RPS6P62753 249 aaKnown RBP18.8■□□□□ 0.6
CKS1B-202ENST00000368436 GRIN2CQ14957 1233 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 RGS22Q8NE09 1264 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 HERVK_113Q902F9 699 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 TIFAQ96CG3 184 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 ZKSCAN3Q9BRR0 538 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 TRPV6Q9H1D0 765 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 HIPK3Q9H422 1215 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 POLR3EQ9NVU0 708 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 GBF1Q92538 1859 aa18.8■□□□□ 0.6
CKS1B-202ENST00000368436 UMODL1Q5DID0 1318 aa18.79■□□□□ 0.6
CKS1B-202ENST00000368436 MYH6P13533 1939 aa18.79■□□□□ 0.6
CKS1B-202ENST00000368436 CCDC178Q5BJE1 867 aa18.79■□□□□ 0.6
CKS1B-202ENST00000368436 CWC27Q6UX04 472 aaKnown RBP18.79■□□□□ 0.6
CKS1B-202ENST00000368436 DNERQ8NFT8 737 aa18.79■□□□□ 0.6
CKS1B-202ENST00000368436 NOC4LQ9BVI4 516 aaKnown RBP18.79■□□□□ 0.6
CKS1B-202ENST00000368436 MAF1Q9H063 256 aa18.79■□□□□ 0.6
CKS1B-202ENST00000368436 ZNF576Q9H609 170 aa18.79■□□□□ 0.6
CKS1B-202ENST00000368436 GRXCR1A8MXD5 290 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 HIP1O00291 1037 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 GOLGA8HP0CJ92 632 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 CPT1AP50416 773 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 PURAQ00577 322 aaKnown RBP18.78■□□□□ 0.6
CKS1B-202ENST00000368436 IQCA1Q86XH1 822 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 MPHOSPH6Q99547 160 aaKnown RBP18.78■□□□□ 0.6
CKS1B-202ENST00000368436 PBX4Q9BYU1 374 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 ALDH8A1Q9H2A2 487 aaPredicted RBP18.78■□□□□ 0.6
CKS1B-202ENST00000368436 DIAPH3Q9NSV4 1193 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 SCN10AQ9Y5Y9 1956 aa18.78■□□□□ 0.6
CKS1B-202ENST00000368436 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.6
CKS1B-202ENST00000368436 KDM4AO75164 1064 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 FGBP02675 491 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 PBX2P40425 430 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 PDE4DQ08499 809 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 PNMA1Q8ND90 353 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 OR6J1Q8NGC5 347 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 EXOC6Q8TAG9 804 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 DSCC1Q9BVC3 393 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 WNT8AQ9H1J5 351 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 CPVLQ9H3G5 476 aa18.77■□□□□ 0.6
CKS1B-202ENST00000368436 CCL23P55773 120 aa18.76■□□□□ 0.59
CKS1B-202ENST00000368436 SCFD2Q8WU76 684 aa18.76■□□□□ 0.59
CKS1B-202ENST00000368436 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
CKS1B-202ENST00000368436 ZSCAN10Q96SZ4 725 aaPredicted RBP18.76■□□□□ 0.59
CKS1B-202ENST00000368436 MTG1Q9BT17 334 aaPredicted RBP18.76■□□□□ 0.59
CKS1B-202ENST00000368436 CXXC1Q9P0U4 656 aaPredicted RBP18.76■□□□□ 0.59
CKS1B-202ENST00000368436 ZSWIM5Q9P217 1185 aa18.76■□□□□ 0.59
CKS1B-202ENST00000368436 KIAA1217Q5T5P2 1943 aa18.76■□□□□ 0.59
CKS1B-202ENST00000368436 A6NJR5 290 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 B4DLN1 442 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 B4E1Z4 1266 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 KPNA6O60684 536 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 MYL3P08590 195 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 SUPT20HL2P0C7V6 817 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 MRPL12P52815 198 aaKnown RBP18.75■□□□□ 0.59
CKS1B-202ENST00000368436 CDC37Q16543 378 aaPredicted RBP18.75■□□□□ 0.59
CKS1B-202ENST00000368436 USH1GQ495M9 461 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 ASPRV1Q53RT3 343 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 ENAHQ8N8S7 591 aaPredicted RBP18.75■□□□□ 0.59
CKS1B-202ENST00000368436 MTIF3Q9H2K0 278 aaKnown RBP18.75■□□□□ 0.59
CKS1B-202ENST00000368436 KAT14Q9H8E8 782 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 EYSQ5T1H1 3165 aa18.75■□□□□ 0.59
CKS1B-202ENST00000368436 ABCB11O95342 1321 aa18.74■□□□□ 0.59
CKS1B-202ENST00000368436 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms