RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 SRRTQ9BXP5 876 aaKnown RBP20.34■□□□□ 0.85
LMNA-207ENST00000368301 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 ITIH6Q6UXX5 1313 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 HMGB2P26583 209 aaKnown RBP20.34■□□□□ 0.85
LMNA-207ENST00000368301 SPAG1Q07617 926 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 SEPT2Q15019 361 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 CERKLQ49MI3 558 aaPredicted RBP20.34■□□□□ 0.85
LMNA-207ENST00000368301 GPATCH4Q5T3I0 446 aaKnown RBP20.34■□□□□ 0.85
LMNA-207ENST00000368301 MTMR8Q96EF0 704 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 C7orf25Q9BPX7 421 aa20.34■□□□□ 0.85
LMNA-207ENST00000368301 GDF11O95390 407 aa20.33■□□□□ 0.85
LMNA-207ENST00000368301 MCM6Q14566 821 aa20.33■□□□□ 0.85
LMNA-207ENST00000368301 STYK1Q6J9G0 422 aa20.33■□□□□ 0.85
LMNA-207ENST00000368301 CCDC94Q9BW85 323 aaPredicted RBP20.33■□□□□ 0.85
LMNA-207ENST00000368301 IRX2Q9BZI1 471 aaPredicted RBP20.33■□□□□ 0.85
LMNA-207ENST00000368301 MYH7BA7E2Y1 1941 aa20.33■□□□□ 0.85
LMNA-207ENST00000368301 FXR2P51116 673 aaKnown RBP eCLIP20.33■□□□□ 0.841e-7■■□□□ 13.8
LMNA-207ENST00000368301 SNAP25P60880 206 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 JAG1P78504 1218 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 UBXN1Q04323 297 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 CCDC17Q96LX7 622 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 IDI2Q9BXS1 227 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 TDRD3Q9H7E2 651 aaKnown RBP20.33■□□□□ 0.84
LMNA-207ENST00000368301 MAGEF1Q9HAY2 307 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 EXOC1Q9NV70 894 aa20.33■□□□□ 0.84
LMNA-207ENST00000368301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.33■□□□□ 0.847e-11■□□□□ 10.6
LMNA-207ENST00000368301 USP17L15C9J2P7 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L13C9JLJ4 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L11C9JVI0 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L18D6R9N7 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L22D6RA61 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L17D6RBQ6 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L19D6RCP7 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L20D6RJB6 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 PSMA7O14818 248 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 NKRFO15226 690 aaKnown RBP eCLIP20.32■□□□□ 0.84
LMNA-207ENST00000368301 GNG11P61952 73 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L24Q0WX57 530 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 ORC2Q13416 577 aaPredicted RBP20.32■□□□□ 0.84
LMNA-207ENST00000368301 QRICH1Q2TAL8 776 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 PPP1R18Q6NYC8 613 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 USP17L6PQ6QN14 398 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 KCNK18Q7Z418 384 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 CUL5Q93034 780 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 CALML4Q96GE6 196 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 NUP88Q99567 741 aaPredicted RBP20.32■□□□□ 0.84
LMNA-207ENST00000368301 PI4KBQ9UBF8 816 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 MYMKA6NI61 221 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 URI1O94763 535 aaPredicted RBP20.32■□□□□ 0.84
LMNA-207ENST00000368301 ERVK-24P63145 666 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 ECM1Q16610 540 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 KIAA0895Q8NCT3 520 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 C7orf43Q8WVR3 580 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 HAS1Q92839 578 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 PSTPIP2Q9H939 334 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 ADGRG1Q9Y653 693 aa20.32■□□□□ 0.84
LMNA-207ENST00000368301 TUBB4AP04350 444 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 TAL1P17542 331 aaPredicted RBP20.31■□□□□ 0.84
LMNA-207ENST00000368301 STIM1Q13586 685 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 SLFN13Q68D06 897 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 ZNF772Q68DY9 489 aaPredicted RBP20.31■□□□□ 0.84
LMNA-207ENST00000368301 ANKRD40Q6AI12 368 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 ANKRD20A12PQ8NF67 263 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 DHX36Q9H2U1 1008 aaKnown RBP20.31■□□□□ 0.84
LMNA-207ENST00000368301 SLC1A4P43007 532 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 ERCC6LQ2NKX8 1250 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 CNGA4Q8IV77 575 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 MRIQ9BWK5 157 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 ABHD10Q9NUJ1 306 aa20.31■□□□□ 0.84
LMNA-207ENST00000368301 DDX25Q9UHL0 483 aaKnown RBP20.31■□□□□ 0.84
LMNA-207ENST00000368301 PES1O00541 588 aaKnown RBP20.3■□□□□ 0.84
LMNA-207ENST00000368301 RRP1BQ14684 758 aaKnown RBP20.3■□□□□ 0.84
LMNA-207ENST00000368301 DYMQ7RTS9 669 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 SNX29Q8TEQ0 813 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 SLC39A2Q9NP94 309 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 LZTFL1Q9NQ48 299 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 FKBP1AP62942 108 aaKnown RBP20.3■□□□□ 0.84
LMNA-207ENST00000368301 CSGALNACT2Q8N6G5 542 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 ACRBPQ8NEB7 543 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 P2RX5Q93086 422 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 MKL1Q969V6 931 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 DHTKD1Q96HY7 919 aaPredicted RBP20.3■□□□□ 0.84
LMNA-207ENST00000368301 THAP9Q9H5L6 903 aa20.3■□□□□ 0.84
LMNA-207ENST00000368301 ATF5Q9Y2D1 282 aaPredicted RBP20.3■□□□□ 0.84
LMNA-207ENST00000368301 LGALS16A8MUM7 142 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 CCDC175P0C221 793 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 MRPL12P52815 198 aaKnown RBP20.29■□□□□ 0.84
LMNA-207ENST00000368301 TMEM266Q2M3C6 531 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 PPP4R3AQ6IN85 833 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 TATDN1Q6P1N9 297 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 SV2BQ7L1I2 683 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 MB21D1Q8N884 522 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 ZNF507Q8TCN5 953 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 KIFC2Q96AC6 838 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 PRMT6Q96LA8 375 aaPredicted RBP20.29■□□□□ 0.84
LMNA-207ENST00000368301 KANSL2Q9H9L4 492 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 SERPINA10Q9UK55 444 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 SPDYE4A6NLX3 237 aa20.29■□□□□ 0.84
LMNA-207ENST00000368301 FECHP22830 423 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms