RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 TINF2Q9BSI4 451 aa21.58■■□□□ 1.04
LMNA-204ENST00000368298 BIN2Q9UBW5 565 aaPredicted RBP21.58■■□□□ 1.04
LMNA-204ENST00000368298 PTPDC1A2A3K4 754 aa21.57■■□□□ 1.04
LMNA-204ENST00000368298 SOWAHBA6NEL2 793 aa21.57■■□□□ 1.04
LMNA-204ENST00000368298 hCG_1984214I3L0E3 225 aa21.57■■□□□ 1.04
LMNA-204ENST00000368298 PRPF3O43395 683 aaKnown RBP21.57■■□□□ 1.04
LMNA-204ENST00000368298 CACNB2Q08289 660 aaPredicted RBP21.57■■□□□ 1.04
LMNA-204ENST00000368298 ZNF713Q8N859 430 aaPredicted RBP21.57■■□□□ 1.04
LMNA-204ENST00000368298 TBC1D5Q92609 795 aa21.57■■□□□ 1.04
LMNA-204ENST00000368298 RNF26Q9BY78 433 aaPredicted RBP21.57■■□□□ 1.04
LMNA-204ENST00000368298 SLKQ9H2G2 1235 aaPredicted RBP21.57■■□□□ 1.04
LMNA-204ENST00000368298 NRBP1Q9UHY1 535 aa21.57■■□□□ 1.04
LMNA-204ENST00000368298 ASTN1O14525 1302 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 RPTORQ8N122 1335 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 SYNGAP1Q96PV0 1343 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 hCG_1642624A0A1W2PR95 340 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 SCRN1Q12765 414 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 TRIM32Q13049 653 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 ME3Q16798 604 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 SLC30A10Q6XR72 485 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 DNERQ8NFT8 737 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 LIMCH1Q9UPQ0 1083 aa21.56■■□□□ 1.04
LMNA-204ENST00000368298 CYP2C19P33261 490 aa21.55■■□□□ 1.04
LMNA-204ENST00000368298 STK3Q13188 491 aa21.55■■□□□ 1.04
LMNA-204ENST00000368298 PFKFB3Q16875 520 aaPredicted RBP21.55■■□□□ 1.04
LMNA-204ENST00000368298 TEX2Q8IWB9 1127 aa21.55■■□□□ 1.04
LMNA-204ENST00000368298 MORC4Q8TE76 937 aa21.55■■□□□ 1.04
LMNA-204ENST00000368298 CPLX1O14810 134 aa21.54■■□□□ 1.04
LMNA-204ENST00000368298 PRKAR2AP13861 404 aaKnown RBP21.54■■□□□ 1.04
LMNA-204ENST00000368298 MTFR1Q15390 333 aa21.54■■□□□ 1.04
LMNA-204ENST00000368298 PKN1Q16512 942 aa21.54■■□□□ 1.04
LMNA-204ENST00000368298 SYTL5Q8TDW5 730 aaPredicted RBP21.54■■□□□ 1.04
LMNA-204ENST00000368298 DAXXQ9UER7 740 aaPredicted RBP21.54■■□□□ 1.04
LMNA-204ENST00000368298 ADD3Q9UEY8 706 aaKnown RBP21.54■■□□□ 1.04
LMNA-204ENST00000368298 ASB14A6NK59 587 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 SNAI1O95863 264 aaPredicted RBP21.53■■□□□ 1.04
LMNA-204ENST00000368298 CFBP00751 764 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 CYBAP13498 195 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 CCL5P13501 91 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 SCG2P13521 617 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 CALML3P27482 149 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 WWC2Q6AWC2 1192 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 CPLX2Q6PUV4 134 aaKnown RBP21.53■■□□□ 1.04
LMNA-204ENST00000368298 PHKBQ93100 1093 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 PURBQ96QR8 312 aaKnown RBP21.53■■□□□ 1.04
LMNA-204ENST00000368298 HMX1Q9NP08 348 aaPredicted RBP21.53■■□□□ 1.04
LMNA-204ENST00000368298 PAK6Q9NQU5 681 aaPredicted RBP21.53■■□□□ 1.04
LMNA-204ENST00000368298 BARHL2Q9NY43 387 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 CENPFP49454 3210 aa21.53■■□□□ 1.04
LMNA-204ENST00000368298 PIK3CDO00329 1044 aa21.52■■□□□ 1.04
LMNA-204ENST00000368298 LARGE1O95461 756 aa21.52■■□□□ 1.04
LMNA-204ENST00000368298 ALDH5A1P51649 535 aaPredicted RBP21.52■■□□□ 1.04
LMNA-204ENST00000368298 PPP1R18Q6NYC8 613 aa21.52■■□□□ 1.04
LMNA-204ENST00000368298 GTF3C6Q969F1 213 aa21.52■■□□□ 1.04
LMNA-204ENST00000368298 ZSCAN31Q96LW9 406 aaPredicted RBP21.52■■□□□ 1.04
LMNA-204ENST00000368298 UNC93B1Q9H1C4 597 aa21.52■■□□□ 1.04
LMNA-204ENST00000368298 COL20A1Q9P218 1284 aa21.52■■□□□ 1.04
LMNA-204ENST00000368298 GCOM1H8Y6P7 765 aaPredicted RBP21.52■■□□□ 1.03
LMNA-204ENST00000368298 ST18O60284 1047 aa21.52■■□□□ 1.03
LMNA-204ENST00000368298 CDKL5O76039 1030 aa21.52■■□□□ 1.03
LMNA-204ENST00000368298 POLR2MP0CAP2 368 aa21.52■■□□□ 1.03
LMNA-204ENST00000368298 ARMCX2Q7L311 632 aa21.52■■□□□ 1.03
LMNA-204ENST00000368298 HEATR3Q7Z4Q2 680 aa21.52■■□□□ 1.03
LMNA-204ENST00000368298 TRIM22Q8IYM9 498 aa21.52■■□□□ 1.03
LMNA-204ENST00000368298 GPKOWQ92917 476 aaPredicted RBP eCLIP21.52■■□□□ 1.03
LMNA-204ENST00000368298 STXBP3O00186 592 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 MEIS2O14770 477 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 GJB1P08034 283 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 CAPN2P17655 700 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 EDNRBP24530 442 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 AKAP17AQ02040 695 aaKnown RBP21.51■■□□□ 1.03
LMNA-204ENST00000368298 SSRP1Q08945 709 aaKnown RBP21.51■■□□□ 1.03
LMNA-204ENST00000368298 TYW1BQ6NUM6 668 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 NOL8Q76FK4 1167 aaKnown RBP21.51■■□□□ 1.03
LMNA-204ENST00000368298 TRPV1Q8NER1 839 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 NSUN6Q8TEA1 469 aaKnown RBP21.51■■□□□ 1.03
LMNA-204ENST00000368298 TAAR1Q96RJ0 339 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 SLC26A6Q9BXS9 759 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.51■■□□□ 1.03
LMNA-204ENST00000368298 RNF208Q9H0X6 261 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 ABHD16BQ9H3Z7 469 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 PSTPIP2Q9H939 334 aa21.51■■□□□ 1.03
LMNA-204ENST00000368298 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.51■■□□□ 1.03
LMNA-204ENST00000368298 MCM3APO60318 1980 aa21.5■■□□□ 1.03
LMNA-204ENST00000368298 CTDNEP1O95476 244 aa21.5■■□□□ 1.03
LMNA-204ENST00000368298 ZNF865P0CJ78 1059 aaPredicted RBP21.5■■□□□ 1.03
LMNA-204ENST00000368298 IWS1Q96ST2 819 aa21.5■■□□□ 1.03
LMNA-204ENST00000368298 TMEM106CQ9BVX2 250 aa21.5■■□□□ 1.03
LMNA-204ENST00000368298 KATNBL1Q9H079 304 aa21.5■■□□□ 1.03
LMNA-204ENST00000368298 SH2B1Q9NRF2 756 aaPredicted RBP21.5■■□□□ 1.03
LMNA-204ENST00000368298 CNPY2Q9Y2B0 182 aa21.5■■□□□ 1.03
LMNA-204ENST00000368298 STK36Q9NRP7 1315 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 ESYT2A0FGR8 921 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 B4DLN1 442 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 DEXIO95424 95 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 CCND3P30281 292 aaPredicted RBP21.49■■□□□ 1.03
LMNA-204ENST00000368298 HOXA13P31271 388 aaPredicted RBP21.49■■□□□ 1.03
LMNA-204ENST00000368298 RGS19P49795 217 aa21.49■■□□□ 1.03
LMNA-204ENST00000368298 MRPL12P52815 198 aaKnown RBP21.49■■□□□ 1.03
LMNA-204ENST00000368298 NAPAP54920 295 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms