RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ZNF445P59923 1031 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
PTPRK-207ENST00000368226 BRINP3Q76B58 766 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 PI4K2BQ8TCG2 481 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 SWAP70Q9UH65 585 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 OATP04181 439 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 CMA1P23946 247 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 STAT2P52630 851 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 GKAP1Q5VSY0 366 aaPredicted RBP14.15□□□□□ -0.14
PTPRK-207ENST00000368226 IWS1Q96ST2 819 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 GOLGA6BA6NDN3 693 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 BMP3P12645 472 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 MYL7Q01449 175 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 CCDC93Q567U6 631 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 CNOT6LQ96LI5 555 aaKnown RBP14.15□□□□□ -0.14
PTPRK-207ENST00000368226 ATP10DQ9P241 1426 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 CD2BP2O95400 341 aaKnown RBP14.15□□□□□ -0.14
PTPRK-207ENST00000368226 CYP2D6P10635 497 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 MTERF2Q49AM1 385 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 C10orf67Q8IYJ2 551 aa14.15□□□□□ -0.14
PTPRK-207ENST00000368226 BBOX1O75936 387 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 ASPRV1Q53RT3 343 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 KRT26Q7Z3Y9 468 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 LARSQ9P2J5 1176 aaKnown RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 KRIT1O00522 736 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 SH3RF3Q8TEJ3 882 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.151e-9■■□□□ 13.6
PTPRK-207ENST00000368226 DDX41Q9UJV9 622 aaKnown RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 PCDHB4Q9Y5E5 795 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 SSH2Q76I76 1423 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 BUB1BO60566 1050 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 LRRN2O75325 713 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 ADCY8P40145 1251 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 OR8K1Q8NGG5 319 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 ZSWIM5Q9P217 1185 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 PTPN22Q9Y2R2 807 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 NUB1Q9Y5A7 615 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 SYDE2Q5VT97 1194 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 SPATA24Q86W54 205 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 PALM2Q8IXS6 379 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 LARP4BQ92615 738 aaKnown RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 CCDC94Q9BW85 323 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 HESX1Q9UBX0 185 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 AATKQ6ZMQ8 1374 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 CIB2O75838 187 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 TUBB4BP68371 445 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 GRAPQ13588 217 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 GRAPLQ8TC17 118 aaPredicted RBP14.14□□□□□ -0.15
PTPRK-207ENST00000368226 EPSTI1Q96J88 318 aa14.14□□□□□ -0.15
PTPRK-207ENST00000368226 NDUFAB1O14561 156 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 EIF2AK2P19525 551 aaKnown RBP14.13□□□□□ -0.15
PTPRK-207ENST00000368226 LONP1P36776 959 aaKnown RBP14.13□□□□□ -0.15
PTPRK-207ENST00000368226 SLC12A2P55011 1212 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 CEP170P1Q96L14 293 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 KRT12Q99456 494 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 CPVLQ9H3G5 476 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 RGS12O14924 1447 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 SASH1O94885 1247 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 TTBK2Q6IQ55 1244 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 ZNF341Q9BYN7 854 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 LARGE1O95461 756 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 SLC4A1P02730 911 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 RASSF7Q02833 373 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 NSUN7Q8NE18 718 aaKnown RBP14.13□□□□□ -0.15
PTPRK-207ENST00000368226 FBXO18Q8NFZ0 1043 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 STMN2Q93045 179 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 KMT5AQ9NQR1 393 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 SAR1BQ9Y6B6 198 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 TLR3O15455 904 aaKnown RBP14.13□□□□□ -0.15
PTPRK-207ENST00000368226 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 ATP7BP35670 1465 aa14.13□□□□□ -0.15
PTPRK-207ENST00000368226 NR2F2P24468 414 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 PAK2Q13177 524 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 DENND2CQ68D51 928 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 TSTA3Q13630 321 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-207ENST00000368226 CDC37Q16543 378 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-207ENST00000368226 KRT71Q3SY84 523 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 GPATCH4Q5T3I0 446 aaKnown RBP14.12□□□□□ -0.15
PTPRK-207ENST00000368226 CIAPIN1Q6FI81 312 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 ARMC9Q7Z3E5 817 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 THAP12O43422 761 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 AOC3Q16853 763 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 SUPT20HL1Q3ZLR7 823 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 MIS18BP1Q6P0N0 1132 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 SDCCAG8Q86SQ7 713 aaPredicted RBP14.12□□□□□ -0.15
PTPRK-207ENST00000368226 CCDC17Q96LX7 622 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 AXIN2Q9Y2T1 843 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 KDM5CP41229 1560 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 CCND2P30279 289 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 EXOC3L4Q17RC7 722 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.12□□□□□ -0.15
PTPRK-207ENST00000368226 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 PLEKHA8P1O95397 391 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 DDIT3P35638 169 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 MCAMP43121 646 aa14.12□□□□□ -0.15
PTPRK-207ENST00000368226 CDK8P49336 464 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms