RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 RFC4P35249 363 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 MTIF2P46199 727 aaKnown RBP15.97■□□□□ 0.15
CD48-201ENST00000368045 FXR2P51116 673 aaKnown RBP eCLIP15.97■□□□□ 0.15
CD48-201ENST00000368045 CKAP4Q07065 602 aaKnown RBP15.97■□□□□ 0.15
CD48-201ENST00000368045 GRIK5Q16478 980 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 FKBP15Q5T1M5 1219 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 ANKRD40Q6AI12 368 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 FOXR2Q6PJQ5 311 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
CD48-201ENST00000368045 CNBD1Q8NA66 436 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 PLIN2Q99541 437 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 RIOX1Q9H6W3 641 aa15.97■□□□□ 0.15
CD48-201ENST00000368045 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 NFIXQ14938 502 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 CCDC122Q5T0U0 273 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 CENPPQ6IPU0 288 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 SV2BQ7L1I2 683 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 KIAA1328Q86T90 577 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 CERKQ8TCT0 537 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 TBCKQ8TEA7 893 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 TBC1D22AQ8WUA7 517 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 EXOC4Q96A65 974 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 JAKMIP2Q96AA8 810 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 TSGA10Q9BZW7 698 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 LRRC27Q9C0I9 530 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 ACBD3Q9H3P7 528 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 CD209Q9NNX6 404 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 GAKO14976 1311 aa15.96■□□□□ 0.15
CD48-201ENST00000368045 DDX60LQ5H9U9 1706 aaKnown RBP15.96■□□□□ 0.15
CD48-201ENST00000368045 HNRNPH3P31942 346 aaKnown RBP15.95■□□□□ 0.14
CD48-201ENST00000368045 STK4Q13043 487 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 TMEM266Q2M3C6 531 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 TRAPPC3LQ5T215 181 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 PPP1R18Q6NYC8 613 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 MTMR9Q96QG7 549 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 MMTAG2Q9BU76 263 aaKnown RBP15.95■□□□□ 0.14
CD48-201ENST00000368045 NOC4LQ9BVI4 516 aaKnown RBP15.95■□□□□ 0.14
CD48-201ENST00000368045 RAB34Q9BZG1 259 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 SAR1BQ9Y6B6 198 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 NHSQ6T4R5 1651 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 RASSF10A6NK89 507 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 RHBDL3P58872 404 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 GPSM2P81274 684 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 PDIA5Q14554 519 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 ASPRV1Q53RT3 343 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 MIIPQ5JXC2 388 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 USP17L2Q6R6M4 530 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 UNC13DQ70J99 1090 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
CD48-201ENST00000368045 PURBQ96QR8 312 aaKnown RBP15.95■□□□□ 0.14
CD48-201ENST00000368045 NHEJ1Q9H9Q4 299 aaPredicted RBP15.95■□□□□ 0.14
CD48-201ENST00000368045 ABCB6Q9NP58 842 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 GGA1Q9UJY5 639 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 MTMR7Q9Y216 660 aa15.95■□□□□ 0.14
CD48-201ENST00000368045 TARSL2A2RTX5 802 aaKnown RBP15.94■□□□□ 0.14
CD48-201ENST00000368045 UFL1O94874 794 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 RHOXF2BP0C7M4 288 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 ADRA2BP18089 450 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 TECP42680 631 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 VSNL1P62760 191 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 CRY2Q49AN0 593 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 PTF1AQ7RTS3 328 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 GUF1Q8N442 669 aaKnown RBP15.94■□□□□ 0.14
CD48-201ENST00000368045 CEP95Q96GE4 821 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 PIGSQ96S52 555 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 RHOXF2Q9BQY4 288 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 BTAF1O14981 1849 aa15.94■□□□□ 0.14
CD48-201ENST00000368045 C10orf71Q711Q0 1435 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 ADCY7P51828 1080 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 USP14P54578 494 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 PSMD2Q13200 908 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 GRB10Q13322 594 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 CALCRLQ16602 461 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 MAP9Q49MG5 647 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 ARHGAP27Q6ZUM4 889 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 VIPAS39Q9H9C1 493 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 AGPAT5Q9NUQ2 364 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 TRIM10Q9UDY6 481 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 LRWD1Q9UFC0 647 aa15.93■□□□□ 0.14
CD48-201ENST00000368045 H3BQF6 201 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 VAV2P52735 878 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 LRRC63Q05C16 580 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 IQCEQ6IPM2 695 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 CCDC84Q86UT8 332 aaPredicted RBP15.92■□□□□ 0.14
CD48-201ENST00000368045 POTEDQ86YR6 584 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 NOA1Q8NC60 698 aaKnown RBP15.92■□□□□ 0.14
CD48-201ENST00000368045 KIAA0895Q8NCT3 520 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
CD48-201ENST00000368045 CDK5RAP3Q96JB5 506 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 PCMTD1Q96MG8 357 aaPredicted RBP15.92■□□□□ 0.14
CD48-201ENST00000368045 BLOC1S4Q9NUP1 217 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 PODXL2Q9NZ53 605 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 MYH8P13535 1937 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 USP17L5A8MUK1 530 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 SNHG28P0DPA3 235 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 PDHBP11177 359 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 FCER1AP12319 257 aa15.92■□□□□ 0.14
CD48-201ENST00000368045 KIF5AQ12840 1032 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms