RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 COL2A1P02458 1487 aaPredicted RBP13.02□□□□□ -0.33
USF1-201ENST00000368019 SIPA1L1O43166 1804 aa13.02□□□□□ -0.33
USF1-201ENST00000368019 ZBTB43O43298 467 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 IGSF3O75054 1194 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 CCDC175P0C221 793 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 IFNAR1P17181 557 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 PICALMQ13492 652 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 POSTNQ15063 836 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 PPP2R5BQ15173 497 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 GORABQ5T7V8 394 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 PI16Q6UXB8 463 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 GADL1Q6ZQY3 521 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 TC2NQ8N9U0 490 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 MSANTD4Q8NCY6 345 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 LRRN4CLQ8ND94 238 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 SPATA20Q8TB22 786 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 NSUN4Q96CB9 384 aaKnown RBP13.01□□□□□ -0.33
USF1-201ENST00000368019 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 FANCLQ9NW38 375 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.01□□□□□ -0.33
USF1-201ENST00000368019 MAN1B1Q9UKM7 699 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 ITIH6Q6UXX5 1313 aa13.01□□□□□ -0.33
USF1-201ENST00000368019 SZT2Q5T011 3432 aa13□□□□□ -0.33
USF1-201ENST00000368019 FOCADQ5VW36 1801 aa13□□□□□ -0.33
USF1-201ENST00000368019 A0A1B0GTH6 734 aa13□□□□□ -0.33
USF1-201ENST00000368019 BMP15O95972 392 aa13□□□□□ -0.33
USF1-201ENST00000368019 ARID4AP29374 1257 aaPredicted RBP13□□□□□ -0.33
USF1-201ENST00000368019 USP5P45974 858 aa13□□□□□ -0.33
USF1-201ENST00000368019 PLCD1P51178 756 aa13□□□□□ -0.33
USF1-201ENST00000368019 PNOCQ13519 176 aa13□□□□□ -0.33
USF1-201ENST00000368019 IRF5Q13568 498 aa13□□□□□ -0.33
USF1-201ENST00000368019 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
USF1-201ENST00000368019 NR1I3Q14994 352 aa13□□□□□ -0.33
USF1-201ENST00000368019 SAFBQ15424 915 aaKnown RBP eCLIP13□□□□□ -0.33
USF1-201ENST00000368019 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
USF1-201ENST00000368019 CCDC84Q86UT8 332 aaPredicted RBP13□□□□□ -0.33
USF1-201ENST00000368019 SPATA5Q8NB90 893 aa13□□□□□ -0.33
USF1-201ENST00000368019 SMARCE1Q969G3 411 aa13□□□□□ -0.33
USF1-201ENST00000368019 CTAGE1Q96RT6 745 aa13□□□□□ -0.33
USF1-201ENST00000368019 RNF208Q9H0X6 261 aa13□□□□□ -0.33
USF1-201ENST00000368019 GPHNQ9NQX3 736 aaPredicted RBP13□□□□□ -0.33
USF1-201ENST00000368019 RAI14Q9P0K7 980 aa13□□□□□ -0.33
USF1-201ENST00000368019 MYO1AQ9UBC5 1043 aa13□□□□□ -0.33
USF1-201ENST00000368019 RAB21Q9UL25 225 aa13□□□□□ -0.33
USF1-201ENST00000368019 AGTPBP1Q9UPW5 1226 aa13□□□□□ -0.33
USF1-201ENST00000368019 TRIM75PA6NK02 468 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 GOLGA8AA7E2F4 631 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 MAP2K7O14733 419 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 FANCGO15287 622 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 LDHCP07864 332 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 UQCRFS1P1P0C7P4 283 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 MARCKSP29966 332 aaPredicted RBP12.99□□□□□ -0.33
USF1-201ENST00000368019 TXLNAP40222 546 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 ZAP70P43403 619 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 FLT3LGP49771 235 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 GNG11P61952 73 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 UBXN2AP68543 259 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 SSRP1Q08945 709 aaKnown RBP12.99□□□□□ -0.33
USF1-201ENST00000368019 RRP1BQ14684 758 aaKnown RBP12.99□□□□□ -0.33
USF1-201ENST00000368019 SRGAP1Q7Z6B7 1085 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 NOSTRINQ8IVI9 506 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 IGDCC4Q8TDY8 1250 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 PXYLP1Q8TE99 480 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 FUT8Q9BYC5 575 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 KRT23Q9C075 422 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 NBPF3Q9H094 633 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 PUS7LQ9H0K6 701 aaKnown RBP12.99□□□□□ -0.33
USF1-201ENST00000368019 GBP3Q9H0R5 595 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 UNC93B1Q9H1C4 597 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 CWC15Q9P013 229 aaKnown RBP12.99□□□□□ -0.33
USF1-201ENST00000368019 FBXO2Q9UK22 296 aaPredicted RBP12.99□□□□□ -0.33
USF1-201ENST00000368019 MYH6P13533 1939 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 ALPK3Q96L96 1907 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 PLXNB2O15031 1838 aa12.99□□□□□ -0.33
USF1-201ENST00000368019 CCDC196A0A1B0GTZ2 297 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 ADCY3O60266 1144 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 ERLIN1O75477 346 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 SGPL1O95470 568 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 MMP1P03956 469 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 OAS2P29728 719 aaKnown RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 MCAMP43121 646 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 HAND2P61296 217 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 GSTO1P78417 241 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 TREML2Q5T2D2 321 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 TMTC2Q8N394 836 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 PROCA1Q8NCQ7 364 aaPredicted RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 U2AF1L4Q8WU68 220 aaKnown RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 PYM1Q9BRP8 204 aaKnown RBP12.98□□□□□ -0.33
USF1-201ENST00000368019 PRO3102Q9H379 93 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
USF1-201ENST00000368019 LY9Q9HBG7 655 aa12.98□□□□□ -0.33
USF1-201ENST00000368019 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms