RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 HHATQ5VTY9 493 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 PPANQ9NQ55 473 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 BTG4Q9NY30 223 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCDC188H7C350 402 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 STX2P32856 288 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 TRAPPC3LQ5T215 181 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 MB21D2Q8IYB1 491 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 ABCD1P33897 745 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 CDC37Q16543 378 aaPredicted RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 KRT26Q7Z3Y9 468 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 TRIM11Q96F44 468 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 GNPATO15228 680 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 SEC31AO94979 1220 aaKnown RBP12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 IGKV5-2P06315 115 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 GREM2Q9H772 168 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 CPDO75976 1380 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 hCG_1642624A0A1W2PR95 340 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 KRT5P13647 590 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 MMS22LQ6ZRQ5 1243 aa12.93□□□□□ -0.34
CDC42BPA-202ENST00000366764 EIF3CLB5ME19 914 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 EIF3CQ99613 913 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 A0A1W2PQC6 194 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 THAP12O43422 761 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 LIG3P49916 1009 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 EHHADHQ08426 723 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 CDAN1Q8IWY9 1227 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 KCNB2Q92953 911 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 NHEJ1Q9H9Q4 299 aaPredicted RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 HEXIM1O94992 359 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 ADAM9Q13443 819 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 DYMQ7RTS9 669 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 SAMSN1Q9NSI8 373 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 EXOSC10Q01780 885 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 SERPING1P05155 500 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 STRBPQ96SI9 672 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 BCAMP50895 628 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 CFAP157Q5JU67 520 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 GOLPH3LQ9H4A5 285 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 STK10O94804 968 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 ATP1A2P50993 1020 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 AOC3Q16853 763 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCDC144BQ3MJ40 725 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 U2AF1L4Q8WU68 220 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 GAS7O60861 476 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 BPIFB4P59827 614 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 SAP30BPQ9UHR5 308 aaKnown RBP12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 ANAPC4Q9UJX5 808 aa12.92□□□□□ -0.34
CDC42BPA-202ENST00000366764 TROVE2P10155 538 aaKnown RBP eCLIP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 TECP42680 631 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 NCAPH2Q6IBW4 605 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 ACRBPQ8NEB7 543 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCHCR1Q8TD31 782 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 RABL6Q3YEC7 729 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 GABPB2Q8TAK5 448 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 DIS3Q9Y2L1 958 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 NR1D1P20393 614 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 NR5A1Q13285 461 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 DIP2AQ14689 1571 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 KIF11P52732 1056 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 KCNF1Q9H3M0 494 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 ZSWIM5Q9P217 1185 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 RBM43Q6ZSC3 357 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 DGKHQ86XP1 1220 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 TGFBRAP1Q8WUH2 860 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 ACSBG1Q96GR2 724 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 DTNBO60941 627 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 SDR42E1Q8WUS8 393 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 EDEM3Q9BZQ6 932 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 AGTPBP1Q9UPW5 1226 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 TRIM28Q13263 835 aaKnown RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 TMTC3Q6ZXV5 915 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 NPHP4O75161 1426 aaPredicted RBP12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 MYO1CO00159 1063 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 TADA2BQ86TJ2 420 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 ATP2A3Q93084 1043 aa12.91□□□□□ -0.34
CDC42BPA-202ENST00000366764 GRID2IPA4D2P6 1211 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 RASSF7Q02833 373 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCDC63Q8NA47 563 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 MFSD14BQ5SR56 506 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 TOGARAM2Q6ZUX3 1019 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 MIS12Q9H081 205 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 CHRNDQ07001 517 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 TMC4Q7Z404 712 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 CCDC89Q8N998 374 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 ABCB6Q9NP58 842 aa12.9□□□□□ -0.34
CDC42BPA-202ENST00000366764 ITIH6Q6UXX5 1313 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms