RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 ZNF157P51786 506 aaPredicted RBP13.95□□□□□ -0.18
CAPN9-203ENST00000366666 PTPAQ15257 358 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 RASAL3Q86YV0 1011 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 LINC00301Q8NCQ3 95 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 CLEC4DQ8WXI8 215 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 ZNF396Q96N95 335 aaPredicted RBP13.95□□□□□ -0.18
CAPN9-203ENST00000366666 PTPN18Q99952 460 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 RTEL1Q9NZ71 1219 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 TMEM63CQ9P1W3 806 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 CCDC39Q9UFE4 941 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 ZKSCAN5Q9Y2L8 839 aa13.95□□□□□ -0.18
CAPN9-203ENST00000366666 CCL15-CCL14A0A0B4J2E2 113 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 CCDC194A0A1B0GVG4 234 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 ZBED4O75132 1171 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 CFBP00751 764 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 MARCKSP29966 332 aaPredicted RBP13.94□□□□□ -0.18
CAPN9-203ENST00000366666 ZNF174Q15697 407 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 CCL15Q16663 113 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
CAPN9-203ENST00000366666 TXNRD2Q9NNW7 524 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 POLR3EQ9NVU0 708 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 RCOR1Q9UKL0 485 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 CFAP45Q9UL16 551 aa13.94□□□□□ -0.18
CAPN9-203ENST00000366666 BTBD19C9JJ37 291 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 MRPL12P52815 198 aaKnown RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 IRX3P78415 501 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 PLS1Q14651 629 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 RILPL1Q5EBL4 403 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 SNRNP48Q6IEG0 339 aaKnown RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 FASTKD5Q7L8L6 764 aaKnown RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 FAM177A1Q8N128 213 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 TBCKQ8TEA7 893 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 HOXC10Q9NYD6 342 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 GTF2A2P52657 109 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 HERVK_113P62684 666 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 BICD2Q8TD16 824 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 PURBQ96QR8 312 aaKnown RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 SCAND2PQ9GZW5 306 aaPredicted RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.93□□□□□ -0.18
CAPN9-203ENST00000366666 COL20A1Q9P218 1284 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 TLL2Q9Y6L7 1015 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 LCTP09848 1927 aa13.93□□□□□ -0.18
CAPN9-203ENST00000366666 CNMDO75829 334 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 ZBTB48P10074 688 aaPredicted RBP13.92□□□□□ -0.18
CAPN9-203ENST00000366666 MCM7P33993 719 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 GRIN1Q05586 938 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 RGMBQ6NW40 437 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 FCHSD1Q86WN1 690 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 ZIC5Q96T25 663 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 PAGR1Q9BTK6 254 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.92□□□□□ -0.18
CAPN9-203ENST00000366666 ABT1Q9ULW3 272 aaKnown RBP13.92□□□□□ -0.18
CAPN9-203ENST00000366666 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
CAPN9-203ENST00000366666 ABCB11O95342 1321 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 SYCE3A1L190 88 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 PDHXO00330 501 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 CETPP11597 493 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 SLC39A14Q15043 492 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 STK38Q15208 465 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.18
CAPN9-203ENST00000366666 ATL3Q6DD88 541 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 KRT25Q7Z3Z0 450 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 TRERF1Q96PN7 1200 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 PCDHA7Q9UN72 937 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 MRPL11Q9Y3B7 192 aaKnown RBP13.92□□□□□ -0.18
CAPN9-203ENST00000366666 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
CAPN9-203ENST00000366666 FAM155AB1AL88 458 aaPredicted RBP13.91□□□□□ -0.18
CAPN9-203ENST00000366666 SPTLC2O15270 562 aa13.91□□□□□ -0.18
CAPN9-203ENST00000366666 LETM2Q2VYF4 491 aa13.91□□□□□ -0.18
CAPN9-203ENST00000366666 Q3C1V9 767 aa13.91□□□□□ -0.18
CAPN9-203ENST00000366666 UTP14CQ5TAP6 766 aaKnown RBP13.91□□□□□ -0.18
CAPN9-203ENST00000366666 ZFP91Q96JP5 570 aaPredicted RBP13.91□□□□□ -0.18
CAPN9-203ENST00000366666 ANO3Q9BYT9 981 aa13.91□□□□□ -0.18
CAPN9-203ENST00000366666 RBPJLQ9UBG7 517 aa13.91□□□□□ -0.18
CAPN9-203ENST00000366666 ELP1O95163 1332 aa13.91□□□□□ -0.18
CAPN9-203ENST00000366666 TDP2O95551 362 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 YEATS4O95619 227 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 STAT3P40763 770 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 UBXN2AP68543 259 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 GRM1Q13255 1194 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 SLC30A10Q6XR72 485 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 TEX13BQ9BXU2 312 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 TMEM88BA6NKF7 163 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 FDX1P10109 184 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 ME1P48163 572 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 PTGDRQ13258 359 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 NEK8Q86SG6 692 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 UIMC1Q96RL1 719 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 TSPY26PQ9H489 355 aa13.9□□□□□ -0.18
CAPN9-203ENST00000366666 A0A0U1RQG5 324 aaPredicted RBP13.89□□□□□ -0.19
CAPN9-203ENST00000366666 GCOM1H8Y6P7 765 aaPredicted RBP13.89□□□□□ -0.19
CAPN9-203ENST00000366666 IGF2BP3O00425 579 aaKnown RBP eCLIP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms