RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ATP2B4P23634 1241 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNF568Q3ZCX4 644 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 PRR16Q569H4 304 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 HLA-DQA1Q5Y7H0 255 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 CYP2R1Q6VVX0 501 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 POLNQ7Z5Q5 900 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 RALYLQ86SE5 291 aaKnown RBP0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 IFNL2Q8IZJ0 200 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 KLHL36Q8N4N3 616 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 FAM13CQ8NE31 585 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 POM121Q96HA1 1249 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 CALR3Q96L12 384 aaKnown RBP0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 LMF1Q96S06 567 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 JMJD8Q96S16 334 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 WRNIP1Q96S55 665 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 GORASP1Q9BQQ3 440 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 PARPBPQ9NWS1 579 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 NLRP2Q9NX02 1062 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 PLA2G2DQ9UNK4 145 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 MTMR7Q9Y216 660 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 PCDHB5Q9Y5E4 795 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 HCFC2Q9Y5Z7 792 aa0.98□□□□□ -2.25
RNU6-54P-201ENST00000365563 ENC1O14682 589 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 FZD6O60353 706 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 B4GALT4O60513 344 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNF28P17035 718 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 NPR3P17342 541 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 ACO1P21399 889 aaKnown RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 GSTT1P30711 240 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 POU4F1Q01851 419 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 SF3B2Q13435 895 aaKnown RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 FNDC7Q5VTL7 733 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 AGBL4Q5VU57 503 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 PCNX4Q63HM2 1172 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 TCTN3Q6NUS6 607 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZPBP2Q6X784 338 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 TPTE2Q6XPS3 522 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 ETV3LQ6ZN32 361 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 RD3Q7Z3Z2 195 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 PHACTR4Q8IZ21 702 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 Q8N9P0 234 aaPredicted RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 NETO2Q8NC67 525 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 IL17DQ8TAD2 202 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 STK32AQ8WU08 396 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 GTF3C2Q8WUA4 911 aaPredicted RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 MBD6Q96DN6 1003 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 YTHDC1Q96MU7 727 aaKnown RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZNF703Q9H7S9 590 aaPredicted RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 NGRNQ9NPE2 291 aaKnown RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 RNF7Q9UBF6 113 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 FTSJ1Q9UET6 329 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 TMEFF2Q9UIK5 374 aaPredicted RBP0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 ZMIZ1Q9ULJ6 1067 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 COX11Q9Y6N1 276 aa0.97□□□□□ -2.25
RNU6-54P-201ENST00000365563 MYADML2A6NDP7 307 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 KCNAB3O43448 404 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 SIGLEC6O43699 453 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 RAD17O75943 681 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 C1RP00736 705 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 C8BP07358 591 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 GLI4P10075 376 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 KRT4P19013 534 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 TACR1P25103 407 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 BMP8BP34820 402 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 PTGS2P35354 604 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 PRR31Q5SQ13 230 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 GAL3ST3Q96A11 431 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 ACSF2Q96CM8 615 aaPredicted RBP0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 CLIC6Q96NY7 704 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 LRRC37BQ96QE4 947 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 PTPN18Q99952 460 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 UNKLQ9H9P5 680 aaKnown RBP0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 PACSIN3Q9UKS6 424 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 BRPF3Q9ULD4 1205 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 SLC30A1Q9Y6M5 507 aa0.96□□□□□ -2.26
RNU6-54P-201ENST00000365563 SPATA31A6Q5VVP1 1343 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 MUC5BQ9HC84 5762 aaPredicted RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 EIF1AYO14602 144 aaKnown RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 CYP27B1O15528 508 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 NDUFB5O43674 189 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 PAGE1O75459 146 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 PRAMEF1O95521 474 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 CNOT4O95628 575 aaKnown RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ITGA1P56199 1179 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 HHEXQ03014 270 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 NFATC3Q12968 1075 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ORC1Q13415 861 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 PDZRN4Q6ZMN7 1036 aaPredicted RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 Q6ZPA2 131 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ERICH6Q7L0X2 663 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 TAX1BP1Q86VP1 789 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZC3H7AQ8IWR0 971 aaKnown RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 SLFN12Q8IYM2 578 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 RPUSD2Q8IZ73 545 aaKnown RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 FUKQ8N0W3 1084 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 ZBTB8BQ8NAP8 495 aaPredicted RBP0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 CCDC74BQ96LY2 380 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 GNRHR2Q96P88 292 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 BCO2Q9BYV7 579 aa0.95□□□□□ -2.26
RNU6-54P-201ENST00000365563 SLC29A3Q9BZD2 475 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms