RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 SLC28A3Q9HAS3 691 aa24.93■■□□□ 1.58
CD47-202ENST00000361309 SALL3Q9BXA9 1300 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 NFIBO00712 420 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 ALDH5A1P51649 535 aaPredicted RBP24.92■■□□□ 1.58
CD47-202ENST00000361309 CCDC85BQ15834 202 aaPredicted RBP24.92■■□□□ 1.58
CD47-202ENST00000361309 SYDE2Q5VT97 1194 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 BTNL9Q6UXG8 535 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 RPUSD2Q8IZ73 545 aaKnown RBP24.92■■□□□ 1.58
CD47-202ENST00000361309 SCLYQ96I15 445 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 ALDH8A1Q9H2A2 487 aaPredicted RBP24.92■■□□□ 1.58
CD47-202ENST00000361309 TOMM22Q9NS69 142 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 ADD3Q9UEY8 706 aaKnown RBP24.92■■□□□ 1.58
CD47-202ENST00000361309 SCN10AQ9Y5Y9 1956 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 TRANK1O15050 2925 aa24.92■■□□□ 1.58
CD47-202ENST00000361309 FRMPD2Q68DX3 1309 aaPredicted RBP24.91■■□□□ 1.58
CD47-202ENST00000361309 FGRP09769 529 aa24.91■■□□□ 1.58
CD47-202ENST00000361309 RABGGTBP53611 331 aa24.91■■□□□ 1.58
CD47-202ENST00000361309 ATXN2LQ8WWM7 1075 aaKnown RBP24.91■■□□□ 1.58
CD47-202ENST00000361309 WDR11Q9BZH6 1224 aa24.91■■□□□ 1.58
CD47-202ENST00000361309 GPCPD1Q9NPB8 672 aa24.91■■□□□ 1.58
CD47-202ENST00000361309 THEGQ9P2T0 379 aa24.91■■□□□ 1.58
CD47-202ENST00000361309 PTPDC1A2A3K4 754 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 TNFRSF10AO00220 468 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 ALX1Q15699 326 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 RRP12Q5JTH9 1297 aaKnown RBP24.9■■□□□ 1.58
CD47-202ENST00000361309 VWCEQ96DN2 955 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 TMEM47Q9BQJ4 181 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 TRMT13Q9NUP7 481 aaKnown RBP24.9■■□□□ 1.58
CD47-202ENST00000361309 POLR3EQ9NVU0 708 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 SLC4A7Q9Y6M7 1214 aa24.9■■□□□ 1.58
CD47-202ENST00000361309 TRIP12Q14669 1992 aaPredicted RBP24.89■■□□□ 1.58
CD47-202ENST00000361309 TOP1P11387 765 aaKnown RBP24.89■■□□□ 1.58
CD47-202ENST00000361309 EVI5LQ96CN4 794 aa24.89■■□□□ 1.58
CD47-202ENST00000361309 HELLSQ9NRZ9 838 aa24.89■■□□□ 1.58
CD47-202ENST00000361309 TCF20Q9UGU0 1960 aaKnown RBP24.89■■□□□ 1.57
CD47-202ENST00000361309 LOC102724159A0A0B4J2E5 919 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 RBM47A0AV96 593 aaKnown RBP24.88■■□□□ 1.57
CD47-202ENST00000361309 ZBBXA8MT70 800 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 MYL3P08590 195 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 CYP2C9P11712 490 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 MYOGP15173 224 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 PURAQ00577 322 aaKnown RBP24.88■■□□□ 1.57
CD47-202ENST00000361309 PWP2Q15269 919 aaKnown RBP24.88■■□□□ 1.57
CD47-202ENST00000361309 SLC30A10Q6XR72 485 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 ASB2Q96Q27 587 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 ZBTB47Q9UFB7 747 aaPredicted RBP24.88■■□□□ 1.57
CD47-202ENST00000361309 BDP1A6H8Y1 2624 aa24.88■■□□□ 1.57
CD47-202ENST00000361309 TNKSO95271 1327 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 FGAP02671 866 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 SUPT20HL2P0C7V6 817 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 CALML3P27482 149 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 CPT1AP50416 773 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 ANKRD45Q5TZF3 282 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 OR6J1Q8NGC5 347 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 CLEC4DQ8WXI8 215 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 FAM227BQ96M60 508 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 TCP11L1Q9NUJ3 509 aa24.87■■□□□ 1.57
CD47-202ENST00000361309 TANC1Q9C0D5 1861 aa24.86■■□□□ 1.57
CD47-202ENST00000361309 PDHBP11177 359 aa24.86■■□□□ 1.57
CD47-202ENST00000361309 PPP2R2DQ66LE6 453 aa24.86■■□□□ 1.57
CD47-202ENST00000361309 GPHNQ9NQX3 736 aaPredicted RBP24.86■■□□□ 1.57
CD47-202ENST00000361309 PCDHA11Q9Y5I1 949 aa24.86■■□□□ 1.57
CD47-202ENST00000361309 TET1Q8NFU7 2136 aa24.86■■□□□ 1.57
CD47-202ENST00000361309 MYH6P13533 1939 aa24.86■■□□□ 1.57
CD47-202ENST00000361309 A0A0D9SFI3 127 aa24.85■■□□□ 1.57
CD47-202ENST00000361309 ATP2A2P16615 1042 aaKnown RBP24.85■■□□□ 1.57
CD47-202ENST00000361309 MRPS5P82675 430 aaKnown RBP24.85■■□□□ 1.57
CD47-202ENST00000361309 TTLL4Q14679 1199 aa24.85■■□□□ 1.57
CD47-202ENST00000361309 MCMDC2Q4G0Z9 681 aa24.85■■□□□ 1.57
CD47-202ENST00000361309 RNF207Q6ZRF8 634 aa24.85■■□□□ 1.57
CD47-202ENST00000361309 DEFB128Q7Z7B8 93 aa24.85■■□□□ 1.57
CD47-202ENST00000361309 MTG1Q9BT17 334 aaPredicted RBP24.85■■□□□ 1.57
CD47-202ENST00000361309 PRRC2BQ5JSZ5 2229 aaKnown RBP24.85■■□□□ 1.57
CD47-202ENST00000361309 PFKMP08237 780 aa24.84■■□□□ 1.57
CD47-202ENST00000361309 PDE4DQ08499 809 aa24.84■■□□□ 1.57
CD47-202ENST00000361309 NBPF20Q3BBV1 942 aa24.84■■□□□ 1.57
CD47-202ENST00000361309 FAM47CQ5HY64 1035 aa24.84■■□□□ 1.57
CD47-202ENST00000361309 PPP1R13LQ8WUF5 828 aa24.84■■□□□ 1.57
CD47-202ENST00000361309 HSPD1P10809 573 aaKnown RBP24.83■■□□□ 1.57
CD47-202ENST00000361309 PDE1AP54750 535 aa24.83■■□□□ 1.57
CD47-202ENST00000361309 HAND2P61296 217 aa24.83■■□□□ 1.57
CD47-202ENST00000361309 RPS6P62753 249 aaKnown RBP24.83■■□□□ 1.57
CD47-202ENST00000361309 ZNF543Q08ER8 600 aa24.83■■□□□ 1.57
CD47-202ENST00000361309 PPP2R5BQ15173 497 aa24.83■■□□□ 1.57
CD47-202ENST00000361309 ADAMTS19Q8TE59 1207 aa24.83■■□□□ 1.57
CD47-202ENST00000361309 KIAA1217Q5T5P2 1943 aa24.82■■□□□ 1.56
CD47-202ENST00000361309 NKRFO15226 690 aaKnown RBP eCLIP24.82■■□□□ 1.56
CD47-202ENST00000361309 BRDTQ58F21 947 aaPredicted RBP24.82■■□□□ 1.56
CD47-202ENST00000361309 ZNF589Q86UQ0 364 aaPredicted RBP24.82■■□□□ 1.56
CD47-202ENST00000361309 MICALL1Q8N3F8 863 aa24.82■■□□□ 1.56
CD47-202ENST00000361309 COPS5Q92905 334 aa24.82■■□□□ 1.56
CD47-202ENST00000361309 MPHOSPH6Q99547 160 aaKnown RBP24.82■■□□□ 1.56
CD47-202ENST00000361309 PNMA2Q9UL42 364 aa24.82■■□□□ 1.56
CD47-202ENST00000361309 RAD50Q92878 1312 aa24.82■■□□□ 1.56
CD47-202ENST00000361309 XIRP2A4UGR9 3374 aa24.81■■□□□ 1.56
CD47-202ENST00000361309 EDNRBP24530 442 aa24.81■■□□□ 1.56
CD47-202ENST00000361309 DNERQ8NFT8 737 aa24.81■■□□□ 1.56
CD47-202ENST00000361309 SCFD2Q8WU76 684 aa24.81■■□□□ 1.56
CD47-202ENST00000361309 ZMYM6O95789 1325 aa24.81■■□□□ 1.56
CD47-202ENST00000361309 WDR19Q8NEZ3 1342 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms