RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 OTUD6AQ7L8S5 288 aa14.58□□□□□ -0.07
CCDC144A-203ENST00000360495 BLIDQ8IZY5 108 aa14.58□□□□□ -0.07
CCDC144A-203ENST00000360495 PPME1Q9Y570 386 aa14.58□□□□□ -0.07
CCDC144A-203ENST00000360495 DCAF8L1A6NGE4 600 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 DCTN3O75935 186 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 YWHAEP62258 255 aaKnown RBP14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SCRN1Q12765 414 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SLC39A14Q15043 492 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 C6orf118Q5T5N4 469 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 TPH2Q8IWU9 490 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 EDC3Q96F86 508 aaKnown RBP14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 OSBPL1AQ9BXW6 950 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SMYD2Q9NRG4 433 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 NSFL1CQ9UNZ2 370 aaKnown RBP14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SMCO2A6NFE2 343 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SGK1O00141 431 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 KRT10P13645 584 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 CDAN1Q8IWY9 1227 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 DCLK2Q8N568 766 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 C19orf44Q9H6X5 657 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 WDR91A4D1P6 747 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 NDUFA10O95299 355 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 MT-ND3P03897 115 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 GGCXP38435 758 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 ZAP70P43403 619 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SGO2Q562F6 1265 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 TRIM50Q86XT4 487 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 PANX2Q96RD6 677 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 IWS1Q96ST2 819 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 USP19O94966 1318 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 EIF4E1BA6NMX2 242 aaKnown RBP14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 PPP6R2O75170 966 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 HNRNPCP07910 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 SERPINI1Q99574 410 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 ZCCHC17Q9NP64 241 aaKnown RBP14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 C1orf112Q9NSG2 853 aa14.58□□□□□ -0.08
CCDC144A-203ENST00000360495 KIF24Q5T7B8 1368 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 PRPF6O94906 941 aaKnown RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 ADCY2Q08462 1091 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 PPM1KQ8N3J5 372 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 FAM89AQ96GI7 184 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 CEP19Q96LK0 163 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 FAM135BQ49AJ0 1406 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 OR52Z1P0C646 297 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 OCA2Q04671 838 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 TTBK2Q6IQ55 1244 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 SYT2Q8N9I0 419 aaPredicted RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 MAML1Q92585 1016 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 LRRC59Q96AG4 307 aaKnown RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 EYA1Q99502 592 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 H7C0C1 242 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 CFLARO15519 480 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 ATP5OP48047 213 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 CUL1Q13616 776 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 FAM26FQ5R3K3 315 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 SMYD4Q8IYR2 804 aaPredicted RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 CCDC124Q96CT7 223 aaKnown RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 PITPNM3Q9BZ71 974 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 NYXQ9GZU5 481 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 NHEJ1Q9H9Q4 299 aaPredicted RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 SEPT10Q9P0V9 454 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 CUL7Q14999 1698 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 PLCH2O75038 1416 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 HDLBPQ00341 1268 aaKnown RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 KIF22Q14807 665 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 ARID5BQ14865 1188 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 TRMT10CQ7L0Y3 403 aaKnown RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 HIPK4Q8NE63 616 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 POMGNT1Q8WZA1 660 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 FGD4Q96M96 766 aa14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 ZC3H12CQ9C0D7 883 aaKnown RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 SCHIP1Q9P0W5 487 aaPredicted RBP14.57□□□□□ -0.08
CCDC144A-203ENST00000360495 ZBTB22O15209 634 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 GYG2O15488 501 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 ADAMTS2O95450 1211 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 NSFP46459 744 aaKnown RBP14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 ART3Q13508 389 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 SH2D4AQ9H788 454 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 ZNF711Q9Y462 761 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 GRIN2AQ12879 1464 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 EXOC1LA0A1B0GW35 172 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 TOM1L1O75674 476 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 LONP1P36776 959 aaKnown RBP14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 IRX1P78414 480 aaPredicted RBP14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 AATFQ9NY61 560 aaKnown RBP eCLIP14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 RASSF10A6NK89 507 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 MYO1FO00160 1098 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 CA4P22748 312 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 PDIA3P30101 505 aaKnown RBP14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 PTGDRQ13258 359 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 PLBD2Q8NHP8 589 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 VTI1AQ96AJ9 217 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 TRIM56Q9BRZ2 755 aaKnown RBP14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 CARD10Q9BWT7 1032 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 CXorf56Q9H5V9 222 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 POLR3EQ9NVU0 708 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 MAN1B1Q9UKM7 699 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
CCDC144A-203ENST00000360495 ADCY9O60503 1353 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms