RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 SH2D3CQ8N5H7 860 aa11.04□□□□□ -0.64
TRAPPC2-201ENST00000359680 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 PP2D1A8MPX8 630 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 KRT14P02533 472 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 IL2RBP14784 551 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 GLE1Q53GS7 698 aaKnown RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 CCDC178Q5BJE1 867 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 BLIDQ8IZY5 108 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 C4orf32Q8N8J7 132 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 SMARCAL1Q9NZC9 954 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 EHD2Q9NZN4 543 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 PLAGL2Q9UPG8 496 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 BAZ2AQ9UIF9 1905 aaKnown RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 ANKRD36CQ5JPF3 1778 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 CCDC194A0A1B0GVG4 234 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 PCP11498 1178 aaKnown RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 EIF4A3P38919 411 aaKnown RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 NAP1L1P55209 391 aaKnown RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 PDE4DQ08499 809 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 ANKRD40Q6AI12 368 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 KDM7AQ6ZMT4 941 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 ADGRA1Q86SQ6 560 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 CCDC155Q8N6L0 562 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 KBTBD4Q9NVX7 518 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 ARHGAP20Q9P2F6 1191 aa11.03□□□□□ -0.64
TRAPPC2-201ENST00000359680 LRP5O75197 1615 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 FSBPO95073 299 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 LSP1P33241 339 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 PPP1R2P41236 205 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 PAK2Q13177 524 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 CFAP221Q4G0U5 840 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 MIIPQ5JXC2 388 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 EPN3Q9H201 632 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 CXorf56Q9H5V9 222 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 RBM12Q9NTZ6 932 aaKnown RBP11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 ASAP1Q9ULH1 1129 aa11.02□□□□□ -0.64
TRAPPC2-201ENST00000359680 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 MYO1FO00160 1098 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 ADAMTS3O15072 1205 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 NCK2O43639 380 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 NR1D1P20393 614 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 HNRNPH3P31942 346 aaKnown RBP11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 MAGEA1P43355 309 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 ASIC1P78348 528 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 RNF187Q5TA31 235 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 NAA35Q5VZE5 725 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 ZSCAN29Q8IWY8 852 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 IFT81Q8WYA0 676 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 RNPC3Q96LT9 517 aaKnown RBP11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 CCSER1Q9C0I3 900 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 FAM207AQ9NSI2 230 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 DLEC1Q9Y238 1755 aa11.02□□□□□ -0.65
TRAPPC2-201ENST00000359680 KIF5BP33176 963 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 GUCY1A3Q02108 690 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 NOX5Q96PH1 765 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 CUEDC2Q9H467 287 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 MMRN2Q9H8L6 949 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 MAGEF1Q9HAY2 307 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 NFU1Q9UMS0 254 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 PCDHA4Q9UN74 947 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 HEXIM1O94992 359 aaKnown RBP11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 VEGFAP15692 232 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 RDXP35241 583 aaKnown RBP11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 FNTAP49354 379 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 BRIP1Q9BX63 1249 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 EPB41L5Q9HCM4 733 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 RNF14Q9UBS8 474 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 FAM205AQ6ZU69 1335 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 NUP98P52948 1817 aa11.01□□□□□ -0.65
TRAPPC2-201ENST00000359680 NMT2O60551 498 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 PPP1R37O75864 691 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 LCA5LO95447 670 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 IGHMBP2P38935 993 aaKnown RBP11□□□□□ -0.65
TRAPPC2-201ENST00000359680 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
TRAPPC2-201ENST00000359680 GUCY2DQ02846 1103 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 STK4Q13043 487 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 RRAGAQ7L523 313 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 YTHDF3Q7Z739 585 aaKnown RBP11□□□□□ -0.65
TRAPPC2-201ENST00000359680 IQCKQ8N0W5 287 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 ANKRD13CQ8N6S4 541 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 ZNF473Q8WTR7 871 aaKnown RBP11□□□□□ -0.65
TRAPPC2-201ENST00000359680 GPKOWQ92917 476 aaPredicted RBP eCLIP11□□□□□ -0.65
TRAPPC2-201ENST00000359680 TMEM60Q9H2L4 133 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 POLD4Q9HCU8 107 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 ZNF233A6NK53 670 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 BUB1O43683 1085 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 CLSTN1O94985 981 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 GLI1P08151 1106 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 PLCG1P19174 1290 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 DYNLL1P63167 89 aaKnown RBP11□□□□□ -0.65
TRAPPC2-201ENST00000359680 DDR1Q08345 913 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 PTGISQ16647 500 aa11□□□□□ -0.65
TRAPPC2-201ENST00000359680 VWA3BQ502W6 1294 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms