RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 C12orf42Q96LP6 360 aa15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 SLF1Q9BQI6 1058 aa15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 TANGO6Q9C0B7 1094 aa15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 RANBP17Q9H2T7 1088 aaKnown RBP15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 TMEM63CQ9P1W3 806 aa15.79■□□□□ 0.12
PDLIM5-203ENST00000359265 ADAMTS3O15072 1205 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 FKTNO75072 461 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 VCAM1P19320 739 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 PPIL2Q13356 520 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 MCTP2Q6DN12 878 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 MOB2Q70IA6 237 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 TEX2Q8IWB9 1127 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 CCAR1Q8IX12 1150 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 FSIP1Q8NA03 581 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 MRPS27Q92552 414 aaKnown RBP15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 SLC10A4Q96EP9 437 aa15.78■□□□□ 0.12
PDLIM5-203ENST00000359265 CXCL11O14625 94 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 LIG1P18858 919 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 MARCKSP29966 332 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 SNAP25P60880 206 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 GSE1Q14687 1217 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 INF2Q27J81 1249 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 SH3D19Q5HYK7 790 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 PRPF38AQ8NAV1 312 aaKnown RBP15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 OPTNQ96CV9 577 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 CLMNQ96JQ2 1002 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 RPAP3Q9H6T3 665 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 PSTPIP2Q9H939 334 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 DDX19AQ9NUU7 478 aaKnown RBP15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 FBXO28Q9NVF7 368 aa15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 BIN2Q9UBW5 565 aaPredicted RBP15.77■□□□□ 0.12
PDLIM5-203ENST00000359265 ABCB11O95342 1321 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 FLOT1O75955 427 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 FDX1P10109 184 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 PTPREP23469 700 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 TM4SF4P48230 202 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 CLK2P49760 499 aaKnown RBP15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 MNX1P50219 401 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 HMGCS2P54868 508 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 ORC2Q13416 577 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 ZNF174Q15697 407 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 ZSCAN23Q3MJ62 389 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 USH1GQ495M9 461 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 AXDND1Q5T1B0 1012 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 JAKMIP3Q5VZ66 844 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 CCDC174Q6PII3 467 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 SAMD1Q6SPF0 538 aaPredicted RBP15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 NEK8Q86SG6 692 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 FERMT2Q96AC1 680 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 PNMA2Q9UL42 364 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 CEP290O15078 2479 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 A0A0G2JMZ2 1700 aa15.76■□□□□ 0.11
PDLIM5-203ENST00000359265 LETM1O95202 739 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 CMA1P23946 247 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 MCM7P33993 719 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 FAM160A1Q05DH4 1040 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 AP3B2Q13367 1082 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 PROCA1Q8NCQ7 364 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 NUP62CLQ9H1M0 184 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 TMEM260Q9NX78 707 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 DACT1Q9NYF0 836 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 FBXO2Q9UK22 296 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 PPP1R9AQ9ULJ8 1098 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 KCNH4Q9UQ05 1017 aa15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 MRPL11Q9Y3B7 192 aaKnown RBP15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 CTDP1Q9Y5B0 961 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-203ENST00000359265 A0A0G2JLL6 359 aaPredicted RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 LAD1O00515 517 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 WNT7AO00755 349 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 IRF6O14896 467 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 KINO60870 393 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 ICAM1P05362 532 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 ZNF445P59923 1031 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 UBE2SQ16763 222 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 FASTKD5Q7L8L6 764 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 OTOP1Q7RTM1 612 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 PRRT2Q7Z6L0 340 aaPredicted RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 ZNF579Q8NAF0 562 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 TBCKQ8TEA7 893 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 NAP1L4Q99733 375 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 GOLPH3LQ9H4A5 285 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 TRIM17Q9Y577 477 aa15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 SRPRBQ9Y5M8 271 aaKnown RBP15.74■□□□□ 0.11
PDLIM5-203ENST00000359265 ZBED4O75132 1171 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 NR1I2O75469 434 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 FOSP01100 380 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 ZBTB48P10074 688 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 PTGDRQ13258 359 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 SNAPC2Q13487 334 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 RESP18Q5W5W9 173 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 ARL6IP4Q66PJ3 421 aaKnown RBP15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 WNK4Q96J92 1243 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 CLSTN2Q9H4D0 955 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 FAM13BQ9NYF5 915 aa15.73■□□□□ 0.11
PDLIM5-203ENST00000359265 CCPG1Q9ULG6 757 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms