RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 FTCDO95954 541 aa15.04■□□□□ -0
VCP-201ENST00000358901 C2orf54Q08AI8 447 aa15.04■□□□□ -0
VCP-201ENST00000358901 MAP7D1Q3KQU3 841 aa15.04■□□□□ -0
VCP-201ENST00000358901 CCDC14Q49A88 953 aa15.04■□□□□ -0
VCP-201ENST00000358901 ODR4Q5SWX8 454 aa15.04■□□□□ -0
VCP-201ENST00000358901 KSR1Q8IVT5 923 aa15.04■□□□□ -0
VCP-201ENST00000358901 MAIP1Q8WWC4 291 aa15.04■□□□□ -0
VCP-201ENST00000358901 COA7Q96BR5 231 aa15.04■□□□□ -0
VCP-201ENST00000358901 STK38LQ9Y2H1 464 aa15.04■□□□□ -0
VCP-201ENST00000358901 RRP15Q9Y3B9 282 aaKnown RBP15.04■□□□□ -0
VCP-201ENST00000358901 GJA3Q9Y6H8 435 aa15.04■□□□□ -0
VCP-201ENST00000358901 H0YIN7 160 aa15.03■□□□□ -0
VCP-201ENST00000358901 ADCY8P40145 1251 aa15.03■□□□□ -0
VCP-201ENST00000358901 EPHB4P54760 987 aa15.03■□□□□ -0
VCP-201ENST00000358901 SPATA24Q86W54 205 aa15.03■□□□□ -0
VCP-201ENST00000358901 PIGBQ92521 554 aa15.03■□□□□ -0
VCP-201ENST00000358901 TACO1Q9BSH4 297 aaKnown RBP15.03■□□□□ -0
VCP-201ENST00000358901 NHEJ1Q9H9Q4 299 aaPredicted RBP15.03■□□□□ -0
VCP-201ENST00000358901 MAP3K4Q9Y6R4 1608 aa15.03■□□□□ -0
VCP-201ENST00000358901 KRT19P08727 400 aa15.03■□□□□ -0
VCP-201ENST00000358901 GYS2P54840 703 aa15.03■□□□□ -0
VCP-201ENST00000358901 TERF2Q15554 542 aa15.03■□□□□ -0
VCP-201ENST00000358901 DIXDC1Q155Q3 683 aa15.03■□□□□ -0
VCP-201ENST00000358901 ANKRD20A3Q5VUR7 823 aa15.03■□□□□ -0
VCP-201ENST00000358901 CYB5R4Q7L1T6 521 aa15.03■□□□□ -0
VCP-201ENST00000358901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.03■□□□□ -0
VCP-201ENST00000358901 EXOC4Q96A65 974 aa15.03■□□□□ -0
VCP-201ENST00000358901 OSBPL5Q9H0X9 879 aaPredicted RBP15.03■□□□□ -0
VCP-201ENST00000358901 JRKLQ9Y4A0 524 aa15.03■□□□□ -0
VCP-201ENST00000358901 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
VCP-201ENST00000358901 MOCS3O95396 460 aa15.03■□□□□ -0
VCP-201ENST00000358901 CAPN12Q6ZSI9 719 aa15.03■□□□□ -0
VCP-201ENST00000358901 TOGARAM2Q6ZUX3 1019 aa15.03■□□□□ -0
VCP-201ENST00000358901 RIC8AQ9NPQ8 531 aa15.03■□□□□ -0
VCP-201ENST00000358901 AXIN2Q9Y2T1 843 aa15.03■□□□□ -0
VCP-201ENST00000358901 RABGAP1Q9Y3P9 1069 aa15.03■□□□□ -0
VCP-201ENST00000358901 NOP56O00567 594 aaKnown RBP15.03■□□□□ -0
VCP-201ENST00000358901 ZBED4O75132 1171 aa15.03■□□□□ -0
VCP-201ENST00000358901 DLATP10515 647 aaKnown RBP15.03■□□□□ -0
VCP-201ENST00000358901 SLC16A2P36021 539 aa15.03■□□□□ -0
VCP-201ENST00000358901 IFNAR2P48551 515 aa15.03■□□□□ -0
VCP-201ENST00000358901 APBA1Q02410 837 aa15.03■□□□□ -0
VCP-201ENST00000358901 LLGL1Q15334 1064 aa15.03■□□□□ -0
VCP-201ENST00000358901 HLFQ16534 295 aa15.03■□□□□ -0
VCP-201ENST00000358901 KMT5BQ4FZB7 885 aa15.03■□□□□ -0
VCP-201ENST00000358901 FAM102BQ5T8I3 360 aa15.03■□□□□ -0
VCP-201ENST00000358901 PAXIP1Q6ZW49 1069 aaPredicted RBP15.03■□□□□ -0
VCP-201ENST00000358901 CCDC170Q8IYT3 715 aa15.03■□□□□ -0
VCP-201ENST00000358901 VPS52Q8N1B4 723 aa15.03■□□□□ -0
VCP-201ENST00000358901 CIB2O75838 187 aa15.02■□□□□ -0
VCP-201ENST00000358901 ALAS1P13196 640 aa15.02■□□□□ -0
VCP-201ENST00000358901 TCP11X2Q5H9J9 407 aa15.02■□□□□ -0
VCP-201ENST00000358901 GPATCH4Q5T3I0 446 aaKnown RBP15.02■□□□□ -0
VCP-201ENST00000358901 MAGOHBQ96A72 148 aaKnown RBP15.02■□□□□ -0
VCP-201ENST00000358901 USP17L3A6NCW0 530 aa15.02■□□□□ -0
VCP-201ENST00000358901 USP17L4A6NCW7 530 aa15.02■□□□□ -0
VCP-201ENST00000358901 NDC80O14777 642 aa15.02■□□□□ -0
VCP-201ENST00000358901 MYL1P05976 194 aa15.02■□□□□ -0
VCP-201ENST00000358901 MRPS25P82663 173 aaKnown RBP15.02■□□□□ -0
VCP-201ENST00000358901 ERFEQ4G0M1 354 aa15.02■□□□□ -0
VCP-201ENST00000358901 MCTP2Q6DN12 878 aa15.02■□□□□ -0
VCP-201ENST00000358901 ARMCX5Q6P1M9 558 aa15.02■□□□□ -0
VCP-201ENST00000358901 USP17L1Q7RTZ2 530 aa15.02■□□□□ -0
VCP-201ENST00000358901 CTAGE3PQ8IX95 158 aa15.02■□□□□ -0
VCP-201ENST00000358901 AMNQ9BXJ7 453 aa15.02■□□□□ -0
VCP-201ENST00000358901 BZW2Q9Y6E2 419 aaKnown RBP15.02■□□□□ -0
VCP-201ENST00000358901 MED14O60244 1454 aa15.02□□□□□ -0.01
VCP-201ENST00000358901 MESDQ14696 234 aa15.02□□□□□ -0.01
VCP-201ENST00000358901 XKR9Q5GH70 373 aa15.02□□□□□ -0.01
VCP-201ENST00000358901 CCDC89Q8N998 374 aa15.02□□□□□ -0.01
VCP-201ENST00000358901 NDST4Q9H3R1 872 aa15.02□□□□□ -0.01
VCP-201ENST00000358901 ST7Q9NRC1 585 aa15.02□□□□□ -0.01
VCP-201ENST00000358901 POLR2MP0CAP2 368 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 IFT88Q13099 833 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 CCDC62Q6P9F0 684 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 LMNTD2Q8IXW0 634 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 MB21D2Q8IYB1 491 aaPredicted RBP15.01□□□□□ -0.01
VCP-201ENST00000358901 SPICE1Q8N0Z3 855 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 FAM133AQ8N9E0 248 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 STK17AQ9UEE5 414 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 CUL4BQ13620 913 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 ASPRV1Q53RT3 343 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 KCTD1Q719H9 257 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.01□□□□□ -0.01
VCP-201ENST00000358901 DISC1Q9NRI5 854 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 KLHL14Q9P2G3 628 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 ATP10DQ9P241 1426 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
VCP-201ENST00000358901 MAP2K2P36507 400 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 SLC7A5Q01650 507 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 PPP2R5DQ14738 602 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 STOX1Q6ZVD7 989 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 CCDC110Q8TBZ0 833 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 OXER1Q8TDS5 423 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 TMOD4Q9NZQ9 345 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 ADAMTS1Q9UHI8 967 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 NEDD4P46934 1319 aa15.01□□□□□ -0.01
VCP-201ENST00000358901 CDC27P30260 824 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms