RNA–Protein interactions for RNA: ENST00000357214.5

SFPQ-201, Transcript of splicing factor proline and glutamine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFPQ, Length 3,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-201ENST00000357214 GBP3Q9H0R5 595 aa13.8□□□□□ -0.2
SFPQ-201ENST00000357214 JADE2Q9NQC1 790 aa13.8□□□□□ -0.2
SFPQ-201ENST00000357214 PP2D1A8MPX8 630 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 POTEB2H3BUK9 544 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 MFAP3LO75121 409 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 EZRP15311 586 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CD44P16070 742 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CYLC1P35663 651 aaPredicted RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 LONP1P36776 959 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CASP8Q14790 479 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 NR1I3Q14994 352 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 ZC3H12AQ5D1E8 599 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 RBM26Q5T8P6 1007 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CABP7Q86V35 215 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 PANX2Q96RD6 677 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 MMRN2Q9H8L6 949 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 MCM8Q9UJA3 840 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 TNNI2P48788 182 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 DNA2P51530 1060 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CACNA2D4Q7Z3S7 1137 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 FAM114A1Q8IWE2 563 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 SPDL1Q96EA4 605 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 PSMD1Q99460 953 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 STRCQ7RTU9 1775 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 INHBEP58166 350 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 ADCY2Q08462 1091 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CRYMQ14894 314 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 NONOQ15233 471 aaKnown RBP eCLIP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 CCDC51Q96ER9 411 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 EYA3Q99504 573 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 RAB34Q9BZG1 259 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 UBA5Q9GZZ9 404 aa13.79□□□□□ -0.2
SFPQ-201ENST00000357214 MRPL44Q9H9J2 332 aaKnown RBP13.79□□□□□ -0.2
SFPQ-201ENST00000357214 A0A087X0B3 334 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 A0A1B0GTH6 734 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 FAM237AA0A1B0GTK4 181 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 TRIM49BA6NDI0 452 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 TRIM14Q14142 442 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 SF3B3Q15393 1217 aaKnown RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 OR8K1Q8NGG5 319 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 ZC3H12CQ9C0D7 883 aaKnown RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 INTS13Q9NVM9 706 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 BIN2Q9UBW5 565 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 TRPM3Q9HCF6 1732 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 H7C1D1 291 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 AKR1B10O60218 316 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 PPP1R12BO60237 982 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 TECP42680 631 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 GTF2IP78347 998 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 MDM2Q00987 491 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 DPYDQ12882 1025 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 CCDC181Q5TID7 509 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 ZNF658Q5TYW1 1059 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 GPCPD1Q9NPB8 672 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 ANAPC4Q9UJX5 808 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 ADGRG1Q9Y653 693 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 MAP2K7O14733 419 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 EVX2Q03828 476 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 TDRD12Q587J7 1177 aaKnown RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 DYMQ7RTS9 669 aa13.78□□□□□ -0.2
SFPQ-201ENST00000357214 RPUSD2Q8IZ73 545 aaKnown RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 SH3RF3Q8TEJ3 882 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 ZNF483Q8TF39 744 aaPredicted RBP13.78□□□□□ -0.2
SFPQ-201ENST00000357214 MACROD2A1Z1Q3 448 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 MATR3P43243 847 aaKnown RBP eCLIP13.77□□□□□ -0.2
SFPQ-201ENST00000357214 RWDD2BP57060 319 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 RAD9BQ6WBX8 426 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 CCDC42Q96M95 316 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 ADD3Q9UEY8 706 aaKnown RBP13.77□□□□□ -0.2
SFPQ-201ENST00000357214 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 CDC23Q9UJX2 597 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 EPN1Q9Y6I3 576 aaPredicted RBP13.77□□□□□ -0.2
SFPQ-201ENST00000357214 CNTNAP5Q8WYK1 1306 aa13.77□□□□□ -0.2
SFPQ-201ENST00000357214 KRT86O43790 486 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 ZNF18P17022 549 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 PRCPP42785 496 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 SLF2Q8IX21 1173 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 BICDL2A1A5D9 508 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 ORC4O43929 436 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 USO1O60763 962 aaKnown RBP13.77□□□□□ -0.21
SFPQ-201ENST00000357214 SARSP49591 514 aaKnown RBP13.77□□□□□ -0.21
SFPQ-201ENST00000357214 FXR1P51114 621 aaKnown RBP eCLIP13.77□□□□□ -0.21
SFPQ-201ENST00000357214 KRT83P78385 493 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 BEND6Q5SZJ8 279 aaPredicted RBP13.77□□□□□ -0.21
SFPQ-201ENST00000357214 TRIM65Q6PJ69 517 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 KRT25Q7Z3Z0 450 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 ATRNO75882 1429 aa13.77□□□□□ -0.21
SFPQ-201ENST00000357214 BTDP43251 543 aa13.76□□□□□ -0.21
SFPQ-201ENST00000357214 USP17L2Q6R6M4 530 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms