RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PPP1R14BQ96C90 147 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 CCT8L2Q96SF2 557 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 ERCC6L2Q5T890 1561 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 KDM3AQ9Y4C1 1321 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 AFMP43652 599 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 GUCY2FP51841 1108 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 NUGGCQ68CJ6 796 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 MORC4Q8TE76 937 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 NELFBQ8WX92 580 aa7.21□□□□□ -1.26
TRIM38-201ENST00000357085 LGALS16A8MUM7 142 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 RIPK1Q13546 671 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 NT5DC1Q5TFE4 455 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TRMT44Q8IYL2 757 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 SLC17A8Q8NDX2 589 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 CCDC8Q9H0W5 538 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ABHD10Q9NUJ1 306 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 A0A1W2PRG0 241 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ZMYND10O75800 440 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 LRRC63Q05C16 580 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 RNF26Q9BY78 433 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TCEAL9Q9UHQ7 104 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 STK38LQ9Y2H1 464 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 RABGAP1Q9Y3P9 1069 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 I3L4J1 428 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TATP17735 454 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 STX17P56962 302 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TBCCQ15814 346 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 SPTY2D1Q68D10 685 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ZNF473Q8WTR7 871 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 PARP4Q9UKK3 1724 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ATP5BP06576 529 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ACADSP16219 412 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 GUCY1A3Q02108 690 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 CHMP6Q96FZ7 201 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TRAPPC9Q96Q05 1148 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 PAGR1Q9BTK6 254 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TMEM60Q9H2L4 133 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 CHPF2Q9P2E5 772 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ANAPC4Q9UJX5 808 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 UBE4BO95155 1302 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 RASGRF2O14827 1237 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 LSP1P33241 339 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 IL9RQ01113 521 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 CCDC92Q53HC0 331 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 AGGF1Q8N302 714 aaeCLIP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 NEK9Q8TD19 979 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 EHMT1Q9H9B1 1298 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 SYNGAP1Q96PV0 1343 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 GMNCA6NCL1 334 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 SNRPA1P09661 255 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 C2orf54Q08AI8 447 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 SLF2Q8IX21 1173 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 ZNF189O75820 626 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 COPB1P53618 953 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 KPNB1Q14974 876 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 CDC37Q16543 378 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 APPBP2Q92624 585 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 FAM227BQ96M60 508 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 SLC26A6Q9BXS9 759 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 UBXN6Q9BZV1 441 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 AGLP35573 1532 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 GGPS1O95749 300 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 KIF23Q02241 960 aaPredicted RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 NSMCE1Q8WV22 266 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 MRPL44Q9H9J2 332 aaKnown RBP7.2□□□□□ -1.26
TRIM38-201ENST00000357085 CPDO75976 1380 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 JCADQ9P266 1359 aa7.2□□□□□ -1.26
TRIM38-201ENST00000357085 TOPAZ1Q8N9V7 1692 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ATP8B3O60423 1300 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ASIC1P78348 528 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 CD302Q8IX05 232 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ST13P4Q8IZP2 240 aaPredicted RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 DNAJC7Q99615 494 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 NT5C3AQ9H0P0 336 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 LOXHD1Q8IVV2 1947 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ENC1O14682 589 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 PPP2R2AP63151 447 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 TBC1D8BQ0IIM8 1120 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 PTGISQ16647 500 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 CATSPER1Q8NEC5 780 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 CYFIP2Q96F07 1278 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 FAM81BQ96LP2 452 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 NCOA5Q9HCD5 579 aaKnown RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ABCC6O95255 1503 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 PLEKHG3A1L390 1219 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 CHGBP05060 677 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 MEX3CQ5U5Q3 659 aaKnown RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 SPDYE1Q8NFV5 336 aaPredicted RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 KIFC2Q96AC6 838 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 METTL22Q9BUU2 404 aaPredicted RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 NOC4LQ9BVI4 516 aaKnown RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 MIF4GDA9UHW6 222 aaKnown RBP7.19□□□□□ -1.26
TRIM38-201ENST00000357085 E7EWF7 191 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 RGL1Q9NZL6 768 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ZFATQ9P243 1243 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 CSB-PGBD3P0DP91 1061 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 TROVE2P10155 538 aaKnown RBP eCLIP7.19□□□□□ -1.269e-9■■■■□ 20.8
TRIM38-201ENST00000357085 POLE2P56282 527 aa7.19□□□□□ -1.26
TRIM38-201ENST00000357085 ZMYM1Q5SVZ6 1142 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms