RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 NPY5RQ15761 445 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 TMC4Q7Z404 712 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 DHX37Q8IY37 1157 aaKnown RBP20.96■□□□□ 0.95
PRPF39-201ENST00000355765 CNOT6LQ96LI5 555 aaKnown RBP20.96■□□□□ 0.95
PRPF39-201ENST00000355765 ALS2CR12Q96Q35 445 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 SNAP23O00161 211 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 DNM1LO00429 736 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 PSMA7O14818 248 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 EPHB6O15197 1021 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 WLSQ5T9L3 541 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 NOC4LQ9BVI4 516 aaKnown RBP20.96■□□□□ 0.95
PRPF39-201ENST00000355765 TLR10Q9BXR5 811 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 GREM2Q9H772 168 aa20.96■□□□□ 0.95
PRPF39-201ENST00000355765 PHRF1Q9P1Y6 1649 aaKnown RBP20.96■□□□□ 0.95
PRPF39-201ENST00000355765 AKR1B10O60218 316 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 QPCTQ16769 361 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 TTI2Q6NXR4 508 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 C6orf89Q6UWU4 347 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 OR2W6PQ8NHA6 318 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 TNFRSF25Q93038 417 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 DUSP9Q99956 384 aaKnown RBP20.95■□□□□ 0.94
PRPF39-201ENST00000355765 NUP58Q9BVL2 599 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 FAM207AQ9NSI2 230 aaPredicted RBP20.95■□□□□ 0.94
PRPF39-201ENST00000355765 TPX2Q9ULW0 747 aaKnown RBP20.95■□□□□ 0.94
PRPF39-201ENST00000355765 PLAAQ9Y263 795 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 CHD4Q14839 1912 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 ITGA6P23229 1130 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 PAK2Q13177 524 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 ITGB3BPQ13352 177 aaPredicted RBP20.95■□□□□ 0.94
PRPF39-201ENST00000355765 FUKQ8N0W3 1084 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 CASKIN2Q8WXE0 1202 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 OSBPL7Q9BZF2 842 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 GCFC2P16383 781 aaKnown RBP20.95■□□□□ 0.94
PRPF39-201ENST00000355765 ERCC3P19447 782 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 KRT12Q99456 494 aa20.95■□□□□ 0.94
PRPF39-201ENST00000355765 TACO1Q9BSH4 297 aaKnown RBP20.95■□□□□ 0.94
PRPF39-201ENST00000355765 SOS2Q07890 1332 aaPredicted RBP20.94■□□□□ 0.94
PRPF39-201ENST00000355765 PCCAP05165 728 aaPredicted RBP20.94■□□□□ 0.94
PRPF39-201ENST00000355765 RPSAP08865 295 aaKnown RBP20.94■□□□□ 0.94
PRPF39-201ENST00000355765 TMOD1P28289 359 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 TNFRSF8P28908 595 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 CLNS1AP54105 237 aaKnown RBP20.94■□□□□ 0.94
PRPF39-201ENST00000355765 MTMR8Q96EF0 704 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 KIF1AQ12756 1690 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 PRLRP16471 622 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 RASSF7Q02833 373 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 PLCB4Q15147 1175 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 TMTC2Q8N394 836 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 GDF3Q9NR23 364 aa20.94■□□□□ 0.94
PRPF39-201ENST00000355765 VEGFAP15692 232 aaPredicted RBP20.93■□□□□ 0.94
PRPF39-201ENST00000355765 FUT2Q10981 343 aa20.93■□□□□ 0.94
PRPF39-201ENST00000355765 FAXDC2Q96IV6 333 aa20.93■□□□□ 0.94
PRPF39-201ENST00000355765 BCCIPQ9P287 314 aaKnown RBP eCLIP20.93■□□□□ 0.94
PRPF39-201ENST00000355765 FBXO3Q9UK99 471 aa20.93■□□□□ 0.94
PRPF39-201ENST00000355765 PPP1R12BO60237 982 aaPredicted RBP20.93■□□□□ 0.94
PRPF39-201ENST00000355765 MAGEA1P43355 309 aa20.93■□□□□ 0.94
PRPF39-201ENST00000355765 SATB1Q01826 763 aa20.93■□□□□ 0.94
PRPF39-201ENST00000355765 SF3A3Q12874 501 aaKnown RBP eCLIP20.92■□□□□ 0.949e-11■□□□□ 9.8
PRPF39-201ENST00000355765 NAALADL2Q58DX5 795 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 MIIPQ5JXC2 388 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 ANKRD40Q6AI12 368 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 CABLES1Q8TDN4 633 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 PRPF3O43395 683 aaKnown RBP20.92■□□□□ 0.94
PRPF39-201ENST00000355765 KLRC4O43908 158 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 CFAP221Q4G0U5 840 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 KLHDC7AQ5VTJ3 777 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 RETREG2Q8NC44 543 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 ISCA1Q9BUE6 129 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 PACSIN2Q9UNF0 486 aaPredicted RBP20.92■□□□□ 0.94
PRPF39-201ENST00000355765 LMTK3Q96Q04 1460 aa20.92■□□□□ 0.94
PRPF39-201ENST00000355765 NLRP5P59047 1200 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 SEC23AQ15436 765 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 NACAP1Q9BZK3 213 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 DISC1Q9NRI5 854 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 HMGB1P1B2RPK0 211 aaPredicted RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 FTCDO95954 541 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 GFPT1Q06210 699 aaPredicted RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 MAP3K12Q12852 859 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 LRCH2Q5VUJ6 765 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 ENAHQ8N8S7 591 aaPredicted RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 PROCA1Q8NCQ7 364 aaPredicted RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 SDR42E1Q8WUS8 393 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 ZNF335Q9H4Z2 1342 aaPredicted RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 SKAP2O75563 359 aaPredicted RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 EZRP15311 586 aaKnown RBP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 HLTFQ14527 1009 aaKnown RBP eCLIP20.91■□□□□ 0.94
PRPF39-201ENST00000355765 ANKRD20A8PQ5CZ79 823 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 SGSM3Q96HU1 749 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 MMRN2Q9H8L6 949 aa20.91■□□□□ 0.94
PRPF39-201ENST00000355765 DISP2A7MBM2 1401 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 GMNCA6NCL1 334 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 RRAGAQ7L523 313 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 KLHL7Q8IXQ5 586 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 TEX11Q8IYF3 940 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 SPATA5Q8NB90 893 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 NUP188Q5SRE5 1749 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 CAMTA1Q9Y6Y1 1673 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 GOLGA6L10A6NI86 522 aa20.9■□□□□ 0.94
PRPF39-201ENST00000355765 CSF1RP07333 972 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms