RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 SCYL1Q96KG9 808 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 DPH5Q9H2P9 285 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 SEC31BQ9NQW1 1179 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 NDUFA8P51970 172 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 SPATA1Q5VX52 437 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 RAB3IPQ96QF0 476 aaPredicted RBP19.71■□□□□ 0.75
COL18A1-202ENST00000355480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.71■□□□□ 0.75
COL18A1-202ENST00000355480 DBNLQ9UJU6 430 aaKnown RBP19.71■□□□□ 0.75
COL18A1-202ENST00000355480 ATP10DQ9P241 1426 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 ESYT2A0FGR8 921 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 FAM182BQ5T319 152 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 NXNQ6DKJ4 435 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 PCDHA4Q9UN74 947 aa19.71■□□□□ 0.75
COL18A1-202ENST00000355480 DIXDC1Q155Q3 683 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 RINT1Q6NUQ1 792 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 RETREG2Q8NC44 543 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 INO80B-WBP1J3KQ70 363 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 BUB1BO60566 1050 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-202ENST00000355480 SAT1P21673 171 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 RXRBP28702 533 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 INO80BQ9C086 356 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-202ENST00000355480 ADD3Q9UEY8 706 aaKnown RBP19.7■□□□□ 0.74
COL18A1-202ENST00000355480 PCDHB4Q9Y5E5 795 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 BBOX1O75936 387 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 SLC16A2P36021 539 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 MFAP3P55082 362 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 CFAP43Q8NDM7 1665 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 PSDA5PKW4 1024 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-202ENST00000355480 WDR46O15213 610 aaKnown RBP19.7■□□□□ 0.74
COL18A1-202ENST00000355480 ZMYM1Q5SVZ6 1142 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 NT5C1BQ96P26 610 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 JPH2Q9BR39 696 aaPredicted RBP19.7■□□□□ 0.74
COL18A1-202ENST00000355480 GSTA1P08263 222 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 GSTA2P09210 222 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 RASSF4Q9H2L5 321 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 MAGEF1Q9HAY2 307 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 ZNF148Q9UQR1 794 aa19.7■□□□□ 0.74
COL18A1-202ENST00000355480 MIS18BP1Q6P0N0 1132 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 SLC17A8Q8NDX2 589 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 SKA2Q8WVK7 121 aaPredicted RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 LARP4BQ92615 738 aaKnown RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 ANKRD36BP1Q96IX9 119 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 GPR108Q9NPR9 543 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 TLR7Q9NYK1 1049 aaKnown RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 ZFYVE16Q7Z3T8 1539 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 TTC36A6NLP5 189 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 H7C0C1 242 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 TXNDC9O14530 226 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 ATP5OP48047 213 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 TBC1D10BQ4KMP7 808 aaPredicted RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 RASGRP4Q8TDF6 673 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 EEF2KMTQ96G04 330 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 KANSL2Q9H9L4 492 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 LAD1O00515 517 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 THAP12O43422 761 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 PPFIA4O75335 1185 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 ATF2P15336 505 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 OAS2P29728 719 aaKnown RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 BPIFB4P59827 614 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 TSNAXIP1Q2TAA8 658 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 KCNQ4P56696 695 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 ZNF772Q68DY9 489 aaPredicted RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 RSRC2Q7L4I2 434 aaKnown RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 MAP7D3Q8IWC1 876 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 CNOT6LQ96LI5 555 aaKnown RBP19.69■□□□□ 0.74
COL18A1-202ENST00000355480 PPP2R2CQ9Y2T4 447 aa19.69■□□□□ 0.74
COL18A1-202ENST00000355480 M0R2C6 588 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 RBBP5Q15291 538 aaKnown RBP19.68■□□□□ 0.74
COL18A1-202ENST00000355480 FBXO18Q8NFZ0 1043 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 LRFN2Q9ULH4 789 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 MAD1L1Q9Y6D9 718 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 FAM135BQ49AJ0 1406 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 RAD17O75943 681 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 PTPREP23469 700 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 ARHGAP25P42331 645 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 SH2D4BQ5SQS7 431 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 ARMC9Q7Z3E5 817 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 PGBD1Q96JS3 809 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 TYW1Q9NV66 732 aaKnown RBP19.68■□□□□ 0.74
COL18A1-202ENST00000355480 BLMP54132 1417 aaPredicted RBP19.68■□□□□ 0.74
COL18A1-202ENST00000355480 RBM6P78332 1123 aaKnown RBP19.68■□□□□ 0.74
COL18A1-202ENST00000355480 KMT5AQ9NQR1 393 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 SERPINB13Q9UIV8 391 aa19.68■□□□□ 0.74
COL18A1-202ENST00000355480 CCDC170Q8IYT3 715 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 RNF26Q9BY78 433 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 NOC2LQ9Y3T9 749 aaKnown RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 NR2F2P24468 414 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 BMP3P12645 472 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 TSTA3Q13630 321 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 TTBK2Q6IQ55 1244 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 MYRIPQ8NFW9 859 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 HAUS4Q9H6D7 363 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 HOMER3Q9NSC5 361 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 FMNL1O95466 1100 aaPredicted RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 TCP1P17987 556 aaKnown RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 APOA5Q6Q788 366 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 KRT27Q7Z3Y8 459 aa19.67■□□□□ 0.74
COL18A1-202ENST00000355480 IPO11Q9UI26 975 aaKnown RBP19.67■□□□□ 0.74
COL18A1-202ENST00000355480 TYW5A2RUC4 315 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms