RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NEDD1Q8NHV4 660 aa21.86■■□□□ 1.09
COL13A1-201ENST00000354547 DHTKD1Q96HY7 919 aaPredicted RBP21.86■■□□□ 1.09
COL13A1-201ENST00000354547 RASSF10A6NK89 507 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 N4BP1O75113 896 aaKnown RBP21.85■■□□□ 1.09
COL13A1-201ENST00000354547 PHACTR2O75167 634 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 TDP2O95551 362 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 PLEKP08567 350 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-201ENST00000354547 SRGNP10124 158 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 PRPHP41219 470 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 JAKMIP2Q96AA8 810 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 CDK5RAP3Q96JB5 506 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 LZTS2Q9BRK4 669 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 NHEJ1Q9H9Q4 299 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-201ENST00000354547 A0A1W2PQC6 194 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 WHAMMP3Q1A5X7 153 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 KRT26Q7Z3Y9 468 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 FAM207AQ9NSI2 230 aaPredicted RBP21.85■■□□□ 1.09
COL13A1-201ENST00000354547 LRWD1Q9UFC0 647 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 ZMYND10O75800 440 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 IPO7O95373 1038 aaKnown RBP21.85■■□□□ 1.09
COL13A1-201ENST00000354547 PRR5LQ6MZQ0 368 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 KIAA0895Q8NCT3 520 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 GDAP1L1Q96MZ0 367 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 GGA1Q9UJY5 639 aa21.85■■□□□ 1.09
COL13A1-201ENST00000354547 ROBO3Q96MS0 1386 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 SLC37A4O43826 429 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 SLURP2P0DP57 97 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 LRRC41Q15345 812 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 DRC1Q96MC2 740 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 HAUS4Q9H6D7 363 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 BICDL2A1A5D9 508 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 CCDC66A2RUB6 948 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 ERLIN1O75477 346 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 TNNI2P48788 182 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 AMPD2Q01433 879 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 CALCRLQ16602 461 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 AK8Q96MA6 479 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 MMS19Q96T76 1030 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 SEMA6BQ9H3T3 888 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 MYO1AQ9UBC5 1043 aa21.84■■□□□ 1.09
COL13A1-201ENST00000354547 SV2BQ7L1I2 683 aa21.83■■□□□ 1.09
COL13A1-201ENST00000354547 SMCR8Q8TEV9 937 aaPredicted RBP21.83■■□□□ 1.09
COL13A1-201ENST00000354547 UBXN6Q9BZV1 441 aa21.83■■□□□ 1.09
COL13A1-201ENST00000354547 VPS18Q9P253 973 aa21.83■■□□□ 1.09
COL13A1-201ENST00000354547 SNED1Q8TER0 1413 aa21.83■■□□□ 1.09
COL13A1-201ENST00000354547 GPR75-ASB3A0A0A6YYF3 556 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 ZNF185O15231 689 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 MYL1P05976 194 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 GTF2IP78347 998 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 UBE2SQ16763 222 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 HDXQ7Z353 690 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 MSANTD4Q8NCY6 345 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 NUDT12Q9BQG2 462 aa21.83■■□□□ 1.08
COL13A1-201ENST00000354547 MYMKA6NI61 221 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 AMPD3Q01432 767 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 CCDC102AQ96A19 550 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 MMRN2Q9H8L6 949 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 TNRC6CQ9HCJ0 1690 aaKnown RBP21.82■■□□□ 1.08
COL13A1-201ENST00000354547 SSBP05455 408 aaKnown RBP eCLIP21.82■■□□□ 1.08
COL13A1-201ENST00000354547 CYLC1P35663 651 aaPredicted RBP21.82■■□□□ 1.08
COL13A1-201ENST00000354547 RHBDL3P58872 404 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 MIIPQ5JXC2 388 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 TMED8Q6PL24 325 aaPredicted RBP21.82■■□□□ 1.08
COL13A1-201ENST00000354547 GLIS3Q8NEA6 775 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 CAGE1Q8TC20 777 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 C7orf25Q9BPX7 421 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 JADE2Q9NQC1 790 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 SAR1BQ9Y6B6 198 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.82■■□□□ 1.08
COL13A1-201ENST00000354547 SLC16A2P36021 539 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 LMAN1P49257 510 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 KRT83P78385 493 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 GRB10Q13322 594 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 TUBB2AQ13885 445 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 FKBP15Q5T1M5 1219 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 DPP8Q6V1X1 898 aaPredicted RBP21.82■■□□□ 1.08
COL13A1-201ENST00000354547 TUBB2BQ9BVA1 445 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 POLLQ9UGP5 575 aa21.82■■□□□ 1.08
COL13A1-201ENST00000354547 POTEB2H3BUK9 544 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 KRT86O43790 486 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 MARCH6O60337 910 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 CUEDC2Q9H467 287 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 MAP2K7O14733 419 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 EPHB6O15197 1021 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 PDHBP11177 359 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 AKR1B1P15121 316 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 HNRNPH2P55795 449 aaKnown RBP21.81■■□□□ 1.08
COL13A1-201ENST00000354547 CCDC96Q2M329 555 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 CNNM4Q6P4Q7 775 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 NOC3LQ8WTT2 800 aaKnown RBP21.81■■□□□ 1.08
COL13A1-201ENST00000354547 ADAM21Q9UKJ8 722 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 RAB21Q9UL25 225 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 L1RE1Q9UN81 338 aa21.81■■□□□ 1.08
COL13A1-201ENST00000354547 TRAPPC11Q7Z392 1133 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 C2CD5Q86YS7 1000 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 CCDC42Q96M95 316 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 MXD3Q9BW11 206 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 BLOC1S4Q9NUP1 217 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 ZBED6P86452 979 aa21.8■■□□□ 1.08
COL13A1-201ENST00000354547 VPS72Q15906 364 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms