RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 GSTA4O15217 222 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 RGS16O15492 202 aaPredicted RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 HNRNPCL1O60812 293 aaKnown RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 VAMP4O75379 141 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 NFX1Q12986 1120 aaKnown RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 GCKRQ14397 625 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 KCTD2Q14681 263 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 KRT40Q6A162 431 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 USP26Q9BXU7 913 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 SYCP2Q9BX26 1530 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 MGEA5O60502 916 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 CAVIN2O95810 425 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 ELF1P32519 619 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 PHEXP78562 749 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 MUM1Q2TAK8 710 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 GCNAQ96QF7 691 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 ZNF577Q9BSK1 485 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 NFE2L3Q9Y4A8 694 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 A2MP01023 1474 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 MAP3K19Q56UN5 1328 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 STAT1P42224 750 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 KIF11P52732 1056 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 NLRP12P59046 1061 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 BFSP1Q12934 665 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 KRT27Q7Z3Y8 459 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 RNF10Q8N5U6 811 aaKnown RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 CERKQ8TCT0 537 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 ANKRD36BP1Q96IX9 119 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 LRGUKQ96M69 825 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 FLT4P35916 1363 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 ASXL1Q8IXJ9 1541 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 USP19O94966 1318 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 M0R2C6 588 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 NPR1P16066 1061 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 MORC3Q14149 939 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 ZSCAN10Q96SZ4 725 aaPredicted RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 PEX19P40855 299 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 RPS8P62241 208 aaKnown RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 YWHAEP62258 255 aaKnown RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 ANKRD13CQ8N6S4 541 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 IFT122Q9HBG6 1241 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 KIAA1024Q9UPX6 916 aa10.91□□□□□ -0.66
COL11A1-201ENST00000353414 MRPL11Q9Y3B7 192 aaKnown RBP10.91□□□□□ -0.66
COL11A1-201ENST00000353414 TNFAIP1Q13829 316 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 FAM160B1Q5W0V3 765 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 TMCO5AQ8N6Q1 288 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 THOC2Q8NI27 1593 aaKnown RBP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 KCNJ18B7U540 433 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 ATP6V1E1P36543 226 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 DYNLL1P63167 89 aaKnown RBP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 PABPC4Q13310 644 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 KCNJ12Q14500 433 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 DCAF4L1Q3SXM0 396 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 TBK1Q9UHD2 729 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 IPO11Q9UI26 975 aaKnown RBP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 KLRF2D3W0D1 207 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 CUTAO60888 179 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 CTNNA1P35221 906 aaKnown RBP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 CFAP221Q4G0U5 840 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 CCDC93Q567U6 631 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 DCAF15Q66K64 600 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 EEF1GP26641 437 aaKnown RBP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 LRRC24Q50LG9 513 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 SYCE1Q8N0S2 351 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 HVCN1Q96D96 273 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 DNAJC17Q9NVM6 304 aaKnown RBP10.9□□□□□ -0.66
COL11A1-201ENST00000353414 MROH5Q6ZUA9 1318 aa10.9□□□□□ -0.66
COL11A1-201ENST00000353414 GOLGA8IPA6NC78 632 aa10.9□□□□□ -0.67
COL11A1-201ENST00000353414 GOLGA8JA6NMD2 632 aa10.9□□□□□ -0.67
COL11A1-201ENST00000353414 HNRNPDLO14979 420 aaKnown RBP10.9□□□□□ -0.67
COL11A1-201ENST00000353414 MYL7Q01449 175 aa10.9□□□□□ -0.67
COL11A1-201ENST00000353414 SLFN13Q68D06 897 aa10.9□□□□□ -0.67
COL11A1-201ENST00000353414 SMYD4Q8IYR2 804 aaPredicted RBP10.9□□□□□ -0.67
COL11A1-201ENST00000353414 FAM71BQ8TC56 605 aa10.9□□□□□ -0.67
COL11A1-201ENST00000353414 KRT82Q9NSB4 513 aa10.9□□□□□ -0.67
COL11A1-201ENST00000353414 ZNF335Q9H4Z2 1342 aaPredicted RBP10.9□□□□□ -0.67
COL11A1-201ENST00000353414 HOXA13P31271 388 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 DBN1Q16643 649 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 LRCH2Q5VUJ6 765 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 FAM180AQ6UWF9 173 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 TEX2Q8IWB9 1127 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 MARCH10Q8NA82 808 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 TRPM2O94759 1503 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 CACNB2Q08289 660 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 SARS2Q9NP81 518 aaKnown RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 RIC8AQ9NPQ8 531 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ZMYND10O75800 440 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ESRRBO95718 433 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 INPP5BP32019 993 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 DDIT3P35638 169 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 VCPP55072 806 aaKnown RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 KCNA1Q09470 495 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ACCSLQ4AC99 568 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 SUCLA2Q9P2R7 463 aaPredicted RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 AFF4Q9UHB7 1163 aaKnown RBP10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ARMC9Q7Z3E5 817 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 MYOCDQ8IZQ8 938 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 ARFGAP2Q8N6H7 521 aa10.89□□□□□ -0.67
COL11A1-201ENST00000353414 CCDC94Q9BW85 323 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms