RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 LRWD1Q9UFC0 647 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 LIMA1Q9UHB6 759 aaKnown RBP18.78■□□□□ 0.6
SAMM50-201ENST00000350028 ARFGEF1Q9Y6D6 1849 aa18.78■□□□□ 0.6
SAMM50-201ENST00000350028 LRRC10BA6NIK2 292 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 F5H6K3 240 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 H7C1D1 291 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 TDP2O95551 362 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 KLRC3Q07444 240 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 ANKRD20A12PQ8NF67 263 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 GMLQ99445 158 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 STK17AQ9UEE5 414 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 GDAQ9Y2T3 454 aa18.77■□□□□ 0.6
SAMM50-201ENST00000350028 SPDYE2BA6NHP3 402 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 RIOK3O14730 519 aaKnown RBP18.77■□□□□ 0.59
SAMM50-201ENST00000350028 SLC37A4O43826 429 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 RAD21O60216 631 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 GDF11O95390 407 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 SPDYE6P0CI01 402 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 PPP1R2P41236 205 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 CDC37Q16543 378 aaPredicted RBP18.77■□□□□ 0.59
SAMM50-201ENST00000350028 SHROOM1Q2M3G4 852 aaPredicted RBP18.77■□□□□ 0.59
SAMM50-201ENST00000350028 LARGE2Q8N3Y3 721 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 GIMAP8Q8ND71 665 aaPredicted RBP18.77■□□□□ 0.59
SAMM50-201ENST00000350028 CSRNP1Q96S65 589 aa18.77■□□□□ 0.59
SAMM50-201ENST00000350028 PBX1P40424 430 aa18.76■□□□□ 0.59
SAMM50-201ENST00000350028 DLGAP5Q15398 846 aa18.76■□□□□ 0.59
SAMM50-201ENST00000350028 LRRC15Q8TF66 581 aa18.76■□□□□ 0.59
SAMM50-201ENST00000350028 FAM151AQ8WW52 585 aa18.76■□□□□ 0.59
SAMM50-201ENST00000350028 TRIM9Q9C026 710 aa18.76■□□□□ 0.59
SAMM50-201ENST00000350028 PCDHA1Q9Y5I3 950 aa18.76■□□□□ 0.59
SAMM50-201ENST00000350028 PSMD14O00487 310 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 ARHGAP6O43182 974 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 NDUFB10O96000 172 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 GH2P01242 217 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 DPEP1P16444 411 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 TC2NQ8N9U0 490 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 DHTKD1Q96HY7 919 aaPredicted RBP18.75■□□□□ 0.59
SAMM50-201ENST00000350028 PPP1R13BQ96KQ4 1090 aa18.75■□□□□ 0.59
SAMM50-201ENST00000350028 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.75■□□□□ 0.593e-7■■■■■ 34.2
SAMM50-201ENST00000350028 ZNF70Q9UC06 446 aaPredicted RBP18.75■□□□□ 0.59
SAMM50-201ENST00000350028 DDX25Q9UHL0 483 aaKnown RBP18.75■□□□□ 0.59
SAMM50-201ENST00000350028 PSMA7O14818 248 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 TEX33O43247 280 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 STX10O60499 249 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 KCNA3P22001 575 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 USP11P51784 963 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 GRB10Q13322 594 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 BTNL9Q6UXG8 535 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 SV2BQ7L1I2 683 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 TMEM139Q8IV31 216 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 OGFOD1Q8N543 542 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 NOC3LQ8WTT2 800 aaKnown RBP18.74■□□□□ 0.59
SAMM50-201ENST00000350028 CDK5RAP3Q96JB5 506 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 BAG1Q99933 345 aaPredicted RBP18.74■□□□□ 0.59
SAMM50-201ENST00000350028 AMNQ9BXJ7 453 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 EXOC1Q9NV70 894 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 AKR1B15C9JRZ8 316 aaPredicted RBP18.74■□□□□ 0.59
SAMM50-201ENST00000350028 RAD17O75943 681 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 BMP3P12645 472 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
SAMM50-201ENST00000350028 AP3B2Q13367 1082 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 KRT31Q15323 416 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 PTPN21Q16825 1174 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 SYDE2Q5VT97 1194 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 KRT79Q5XKE5 535 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 PPFIBP1Q86W92 1011 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 PNMA5Q96PV4 448 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 LRRC27Q9C0I9 530 aa18.74■□□□□ 0.59
SAMM50-201ENST00000350028 ITIH6Q6UXX5 1313 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 MYH7BA7E2Y1 1941 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 KCNJ18B7U540 433 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 TCP10L2B9ZVM9 353 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 POLD1P28340 1107 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 COPB1P53618 953 aaKnown RBP18.73■□□□□ 0.59
SAMM50-201ENST00000350028 ASIC1P78348 528 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 JAG1P78504 1218 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 PDE4DQ08499 809 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 KCNJ12Q14500 433 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 COBLL1Q53SF7 1204 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 TCP11X2Q5H9J9 407 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 FKBP1CQ5VVH2 108 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 FBXO11Q86XK2 927 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 KIF18AQ8NI77 898 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 PANX2Q96RD6 677 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 ARHGEF10LQ9HCE6 1279 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 ZNF277Q9NRM2 450 aaPredicted RBP18.73■□□□□ 0.59
SAMM50-201ENST00000350028 UTRNP46939 3433 aa18.73■□□□□ 0.59
SAMM50-201ENST00000350028 ZSCAN12O43309 604 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 SLC26A4O43511 780 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 MARCH6O60337 910 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 GOLGA8FQ08AF8 430 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 GOLGA8DPQ0D2H9 430 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 RRP1BQ14684 758 aaKnown RBP18.72■□□□□ 0.59
SAMM50-201ENST00000350028 SPDYE2Q495Y8 402 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 MOXD1Q6UVY6 613 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 MTMR14Q8NCE2 650 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 AGBL3Q8NEM8 1001 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 ZNF592Q92610 1267 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 THAP9Q9H5L6 903 aa18.72■□□□□ 0.59
SAMM50-201ENST00000350028 BLOC1S4Q9NUP1 217 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms