RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 SEPT6Q14141 434 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 CLASRPQ8N2M8 674 aaKnown RBP13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 SEL1LQ9UBV2 794 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 LRRC10BA6NIK2 292 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 VPS41P49754 854 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 JADE2Q9NQC1 790 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 PLAAQ9Y263 795 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 ATXN2Q99700 1313 aaKnown RBP13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 A0A0G2JLW4 131 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 CCND1P24385 295 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 SMARCA1P28370 1054 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 MRPS25P82663 173 aaKnown RBP13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 SLC43A3Q8NBI5 491 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 KLHL29Q96CT2 875 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 SLC7A5P2Q9GIP4 190 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 CYP46A1Q9Y6A2 500 aa13.44□□□□□ -0.26
CTNNB1-201ENST00000349496 GRIN2DO15399 1336 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 FANCGO15287 622 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 SCG2P13521 617 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 INAQ16352 499 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 C6orf183Q5T699 404 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 UBE3BQ7Z3V4 1068 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 ZSCAN31Q96LW9 406 aaPredicted RBP13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 DMAP1Q9NPF5 467 aaPredicted RBP13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 PHF24Q9UPV7 400 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 KIF11P52732 1056 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 KRT72Q14CN4 511 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 DPCR1Q3MIW9 517 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 KRT27Q7Z3Y8 459 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 UBE2Q1Q7Z7E8 422 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 TTC30BQ8N4P2 665 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 FAM133AQ8N9E0 248 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 RPGRIP1Q96KN7 1286 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 SLC39A3Q9BRY0 314 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 PCDH18Q9HCL0 1135 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 PIK3C2AO00443 1686 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 ENC1O14682 589 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 TMED10P49755 219 aaKnown RBP13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.43□□□□□ -0.264e-8■■■■□ 26.7
CTNNB1-201ENST00000349496 TMEM53Q6P2H8 277 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 PANK4Q9NVE7 773 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 CARD8Q9Y2G2 431 aa13.43□□□□□ -0.26
CTNNB1-201ENST00000349496 A0A0D9SFI3 127 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 HOXD12P35452 270 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 HDAC4P56524 1084 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 NMIQ13287 307 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 CCDC152Q4G0S7 254 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 CRELD2Q6UXH1 353 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 ZNF589Q86UQ0 364 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 SMYD1Q8NB12 490 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 CASP10Q92851 521 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 LRRC27Q9C0I9 530 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 LSG1Q9H089 658 aaKnown RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 PLCB1Q9NQ66 1216 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 GMNCA6NCL1 334 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 H0Y3Z8 333 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 MGRN1O60291 552 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 STX10O60499 249 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 ZKSCAN1P17029 563 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 RAD23BP54727 409 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 CKAP4Q07065 602 aaKnown RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 FXNQ16595 210 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 HELBQ8NG08 1087 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 CEP70Q8NHQ1 597 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 AKAP12Q02952 1782 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 PALM3A6NDB9 673 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 MTTPP55157 894 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 SMUG1Q53HV7 270 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 ARHGEF25Q86VW2 580 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 ERICH1Q86X53 443 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 IFT81Q8WYA0 676 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 EVI5LQ96CN4 794 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 SEC16BQ96JE7 1060 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 CCDC87Q9NVE4 849 aa13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
CTNNB1-201ENST00000349496 TARSL2A2RTX5 802 aaKnown RBP13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 COG7P83436 770 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 CCDC102BQ68D86 513 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 CHST3Q7LGC8 479 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 CCDC197Q8NCU1 140 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 PRCCQ92733 491 aaPredicted RBP13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 OCEL1Q9H607 264 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 SAMD15Q9P1V8 674 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 DKK3Q9UBP4 350 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 CROTQ9UKG9 612 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 TRIM64CA6NLI5 447 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 USP14P54578 494 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 CNTROBQ8N137 903 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 ZNF594Q96JF6 807 aaPredicted RBP13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 FSD1Q9BTV5 496 aa13.41□□□□□ -0.26
CTNNB1-201ENST00000349496 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms