RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 ASIC1P78348 528 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 FOXR2Q6PJQ5 311 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 CCDC170Q8IYT3 715 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 TBC1D16Q8TBP0 767 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 PIGSQ96S52 555 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 MTMR4Q9NYA4 1195 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 SWAP70Q9UH65 585 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 DDX60LQ5H9U9 1706 aaKnown RBP17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 C10orf71Q711Q0 1435 aa17.31■□□□□ 0.36
TNFSF13-202ENST00000349228 ABCB11O95342 1321 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 A0A1W2PQJ5 194 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 CYLC1P35663 651 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 CDK17Q00537 523 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 MSL3Q8N5Y2 521 aaKnown RBP17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 MSANTD4Q8NCY6 345 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 MTMR9Q96QG7 549 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 RAB21Q9UL25 225 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 ERLIN1O75477 346 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 SNHG28P0DPA3 235 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 PDHBP11177 359 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 GYS1P13807 737 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 ADCY7P51828 1080 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 ZBED6P86452 979 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 TBC1D8BQ0IIM8 1120 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 ZSCAN29Q8IWY8 852 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 ERGIC2Q96RQ1 377 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 SLF1Q9BQI6 1058 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 UBXN6Q9BZV1 441 aa17.3■□□□□ 0.36
TNFSF13-202ENST00000349228 USP17L5A8MUK1 530 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 TBC1D8O95759 1140 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 TECP42680 631 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 GABPAQ06546 454 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 CALCRLQ16602 461 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 FKBP15Q5T1M5 1219 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 SP8Q8IXZ3 490 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 PLIN2Q99541 437 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 NAP1L4Q99733 375 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 COA1Q9GZY4 146 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 GBP3Q9H0R5 595 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 LRWD1Q9UFC0 647 aa17.29■□□□□ 0.36
TNFSF13-202ENST00000349228 IGKV6D-41A0A0C4DH26 115 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CTAGE15A4D2H0 777 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 PSMD14O00487 310 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 PES1O00541 588 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CTAGE8P0CG41 777 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 PSMD2Q13200 908 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 ANKRD40Q6AI12 368 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CENPPQ6IPU0 288 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 UNC13DQ70J99 1090 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CTAGE6Q86UF2 777 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CTAGE4Q8IX94 777 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CNOT6LQ96LI5 555 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CHP1Q99653 195 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 MMTAG2Q9BU76 263 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 TTYH3Q9C0H2 523 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 VAT1LQ9HCJ6 419 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 POLLQ9UGP5 575 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 MYO6Q9UM54 1294 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 SLC26A4O43511 780 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 ONECUT3O60422 494 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 IPO7O95373 1038 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 MTIF2P46199 727 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 SEPT2Q15019 361 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 SLC27A3Q5K4L6 730 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 PPP4R3AQ6IN85 833 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 CDK5RAP3Q96JB5 506 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 DAGLAQ9Y4D2 1042 aa17.28■□□□□ 0.36
TNFSF13-202ENST00000349228 PNMA6FA0A0J9YX94 578 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 B4DLN1 442 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 KRT86O43790 486 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 TRIM21P19474 475 aaKnown RBP17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 STK4Q13043 487 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 LRRC15Q8TF66 581 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 NOC4LQ9BVI4 516 aaKnown RBP17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 GLT8D2Q9H1C3 349 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 RIC8AQ9NPQ8 531 aa17.27■□□□□ 0.36
TNFSF13-202ENST00000349228 A0A0U1RQJ8 604 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 EIF3CLB5ME19 914 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 C6orf229H3BNL8 230 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 TTLL1O95922 423 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 GPATCH4Q5T3I0 446 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 WDR59Q6PJI9 974 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 GUF1Q8N442 669 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 ATRIPQ8WXE1 791 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 RPGRIP1Q96KN7 1286 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 EIF3CQ99613 913 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 FUT8Q9BYC5 575 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 CPVLQ9H3G5 476 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 SEC31AO94979 1220 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 GCFC2P16383 781 aaKnown RBP17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 TXKP42681 527 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 AMPD2Q01433 879 aa17.26■□□□□ 0.35
TNFSF13-202ENST00000349228 LRRC63Q05C16 580 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms