RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 ALS2CLQ60I27 953 aa23.78■■□□□ 1.4
TRIM3-201ENST00000345851 NCK2O43639 380 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 XBP1P17861 261 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 EMBQ6PCB8 327 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 MIGA1Q8NAN2 632 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 ZNF473Q8WTR7 871 aaKnown RBP23.77■■□□□ 1.4
TRIM3-201ENST00000345851 JAG2Q9Y219 1238 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 MCM7P33993 719 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 RFC4P35249 363 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 HDLBPQ00341 1268 aaKnown RBP23.77■■□□□ 1.4
TRIM3-201ENST00000345851 V9GY48 417 aaPredicted RBP23.77■■□□□ 1.4
TRIM3-201ENST00000345851 A0A1W2PQC6 194 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 ZSCAN5CA6NGD5 496 aaPredicted RBP23.77■■□□□ 1.4
TRIM3-201ENST00000345851 UQCRFS1P1P0C7P4 283 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 VAV2P52735 878 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 SF3B2Q13435 895 aaKnown RBP23.77■■□□□ 1.4
TRIM3-201ENST00000345851 C8orf74Q6P047 294 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 OSBPL9Q96SU4 736 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 KLC4Q9NSK0 619 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 MAGEC2Q9UBF1 373 aaPredicted RBP23.77■■□□□ 1.4
TRIM3-201ENST00000345851 MYH6P13533 1939 aa23.77■■□□□ 1.4
TRIM3-201ENST00000345851 TCRBV5S4A2TA0A5A2 114 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 CHUKO15111 745 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 TACC1O75410 805 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 FAM153BP0C7A2 387 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 DDR1Q08345 913 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 SPA17Q15506 151 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 PKN1Q16512 942 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 FAM153CQ494X1 144 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 IFT81Q8WYA0 676 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 PURBQ96QR8 312 aaKnown RBP23.76■■□□□ 1.39
TRIM3-201ENST00000345851 EPN3Q9H201 632 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 FAM153AQ9UHL3 310 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 TRPC5Q9UL62 973 aaPredicted RBP23.76■■□□□ 1.39
TRIM3-201ENST00000345851 PDS5AQ29RF7 1337 aaKnown RBP23.76■■□□□ 1.39
TRIM3-201ENST00000345851 SSBP05455 408 aaKnown RBP eCLIP23.76■■□□□ 1.39
TRIM3-201ENST00000345851 DNA2P51530 1060 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 CFAP58Q5T655 872 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 MICALCLQ6ZW33 695 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 CCDC42Q96M95 316 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 UBAC1Q9BSL1 405 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 NFU1Q9UMS0 254 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 MINPP1Q9UNW1 487 aa23.76■■□□□ 1.39
TRIM3-201ENST00000345851 CLGNO14967 610 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 TRIM37O94972 964 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 GUCY2FP51841 1108 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 TBC1D8BQ0IIM8 1120 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 CCDC40Q4G0X9 1142 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 ANKRD13CQ8N6S4 541 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 TRIM58Q8NG06 486 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 PHF20Q9BVI0 1012 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 ZNF233A6NK53 670 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 RASSF10A6NK89 507 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 ATRNO75882 1429 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 NEDD9Q14511 834 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 ZNF662Q6ZS27 426 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 CCDC13Q8IYE1 715 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 N4BP2L2Q92802 583 aaPredicted RBP23.75■■□□□ 1.39
TRIM3-201ENST00000345851 RBM12Q9NTZ6 932 aaKnown RBP23.75■■□□□ 1.39
TRIM3-201ENST00000345851 RMND1Q9NWS8 449 aa23.75■■□□□ 1.39
TRIM3-201ENST00000345851 KIF1CO43896 1103 aaKnown RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 NR1D1P20393 614 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 CARSP49589 748 aaKnown RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 IL17AQ16552 155 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 TYW1BQ6NUM6 668 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 ZNF512BQ96KM6 892 aaPredicted RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 CCT8L2Q96SF2 557 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 PLIN2Q99541 437 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 TUBGCP2Q9BSJ2 902 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 RNF26Q9BY78 433 aaPredicted RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 IFIH1Q9BYX4 1025 aaKnown RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 ATXN2Q99700 1313 aaKnown RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 GSG1L2A8MUP6 293 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 PLEKHA8P1O95397 391 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 DNM2P50570 870 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 ATP2C1P98194 919 aaPredicted RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 CEP57Q86XR8 500 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 ADSSL1Q8N142 457 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 TFCP2L1Q9NZI6 479 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 LRP2BPQ9P2M1 347 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 PPP1R37O75864 691 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 ECM2O94769 699 aaPredicted RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 ALX1Q15699 326 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 TRAPPC3LQ5T215 181 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 RC3H1Q5TC82 1133 aaKnown RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 CCDC170Q8IYT3 715 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 MS4A14Q96JA4 679 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 TTYH3Q9C0H2 523 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 A1CFQ9NQ94 594 aaKnown RBP23.74■■□□□ 1.39
TRIM3-201ENST00000345851 EXOC1Q9NV70 894 aa23.74■■□□□ 1.39
TRIM3-201ENST00000345851 E7EVH7 732 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 SMIM22K7EJ46 135 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 BMP15O95972 392 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 ELF1P32519 619 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 SF3B3Q15393 1217 aaKnown RBP23.73■■□□□ 1.39
TRIM3-201ENST00000345851 PTGISQ16647 500 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 KDM7AQ6ZMT4 941 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 PIK3AP1Q6ZUJ8 805 aa23.73■■□□□ 1.39
TRIM3-201ENST00000345851 NLRP14Q86W24 1093 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms