RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 NNTQ13423 1086 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 ANKRD40Q6AI12 368 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 RCSD1Q6JBY9 416 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 SND1Q7KZF4 910 aaKnown RBP eCLIP23.02■■□□□ 1.28
CLPB-202ENST00000340729 ZNF384Q8TF68 577 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 NOC4LQ9BVI4 516 aaKnown RBP23.02■■□□□ 1.28
CLPB-202ENST00000340729 TMEM60Q9H2L4 133 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 PLEKHA4Q9H4M7 779 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 HYOU1Q9Y4L1 999 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 GRIN2DO15399 1336 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 FLT1P17948 1338 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 ATXN2Q99700 1313 aaKnown RBP23.02■■□□□ 1.28
CLPB-202ENST00000340729 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 MTIF2P46199 727 aaKnown RBP23.02■■□□□ 1.28
CLPB-202ENST00000340729 KLK7P49862 253 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 CYP27A1Q02318 531 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 ITPK1Q13572 414 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 IFIH1Q9BYX4 1025 aaKnown RBP23.02■■□□□ 1.28
CLPB-202ENST00000340729 TRIM9Q9C026 710 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 ATP8A2Q9NTI2 1148 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 ARPP21Q9UBL0 812 aaPredicted RBP23.02■■□□□ 1.28
CLPB-202ENST00000340729 PCDHA13Q9Y5I0 950 aa23.02■■□□□ 1.28
CLPB-202ENST00000340729 NMT2O60551 498 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 NTSR2O95665 410 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 CRKLP46109 303 aaKnown RBP23.01■■□□□ 1.27
CLPB-202ENST00000340729 GLE1Q53GS7 698 aaKnown RBP23.01■■□□□ 1.27
CLPB-202ENST00000340729 ANKS1AQ92625 1134 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 ALS2CR12Q96Q35 445 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 OSBPL9Q96SU4 736 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 LRRC1Q9BTT6 524 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 PCDHA6Q9UN73 950 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 PCDHA8Q9Y5H6 950 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 LOC102724428A0A0B4J2F2 783 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 PP2D1A8MPX8 630 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 PJA2O43164 708 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 SIK1P57059 783 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 CCDC96Q2M329 555 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 DCP1AQ9NPI6 582 aaPredicted RBP23.01■■□□□ 1.27
CLPB-202ENST00000340729 CCDC87Q9NVE4 849 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 DMGDHQ9UI17 866 aaKnown RBP23.01■■□□□ 1.27
CLPB-202ENST00000340729 CAPN6Q9Y6Q1 641 aa23.01■■□□□ 1.27
CLPB-202ENST00000340729 GYG1P46976 350 aa23■■□□□ 1.27
CLPB-202ENST00000340729 GNAQP50148 359 aa23■■□□□ 1.27
CLPB-202ENST00000340729 GTF2A1P52655 376 aaPredicted RBP23■■□□□ 1.27
CLPB-202ENST00000340729 PDE4DQ08499 809 aa23■■□□□ 1.27
CLPB-202ENST00000340729 DGKHQ86XP1 1220 aa23■■□□□ 1.27
CLPB-202ENST00000340729 LRRC15Q8TF66 581 aa23■■□□□ 1.27
CLPB-202ENST00000340729 STIM2Q9P246 746 aa23■■□□□ 1.27
CLPB-202ENST00000340729 BAZ2BQ9UIF8 2168 aaKnown RBP23■■□□□ 1.27
CLPB-202ENST00000340729 SHTN1A0MZ66 631 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 KCNQ2O43526 872 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 GUCY2CP25092 1073 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 PCMTD1Q96MG8 357 aaPredicted RBP22.99■■□□□ 1.27
CLPB-202ENST00000340729 CRNKL1Q9BZJ0 848 aaKnown RBP22.99■■□□□ 1.27
CLPB-202ENST00000340729 ARHGAP20Q9P2F6 1191 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 SIK3Q9Y2K2 1263 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 HOXA7P31268 230 aaPredicted RBP22.99■■□□□ 1.27
CLPB-202ENST00000340729 CCT5P48643 541 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 CAVIN4Q5BKX8 364 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 FAM47AQ5JRC9 791 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 MMS22LQ6ZRQ5 1243 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 NSUN4Q96CB9 384 aaKnown RBP22.99■■□□□ 1.27
CLPB-202ENST00000340729 RNF14Q9UBS8 474 aa22.99■■□□□ 1.27
CLPB-202ENST00000340729 CASZ1Q86V15 1759 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 PLCG1P19174 1290 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 KIF11P52732 1056 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 APBA1Q02410 837 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 GRM4Q14833 912 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 FAM98CQ17RN3 349 aaKnown RBP22.98■■□□□ 1.27
CLPB-202ENST00000340729 HAUS3Q68CZ6 603 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 CNNM4Q6P4Q7 775 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.98■■□□□ 1.27
CLPB-202ENST00000340729 ARHGAP27Q6ZUM4 889 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 CABP7Q86V35 215 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 HDAC7Q8WUI4 952 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 TCP11L1Q9NUJ3 509 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 TSKSQ9UJT2 592 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 FAM169AQ9Y6X4 670 aa22.98■■□□□ 1.27
CLPB-202ENST00000340729 TSPY2A6NKD2 308 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 CAMTA2O94983 1202 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 AMPD3Q01432 767 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 STK4Q13043 487 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 EZH2Q15910 746 aaKnown RBP22.97■■□□□ 1.27
CLPB-202ENST00000340729 CENPPQ6IPU0 288 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 TYW1BQ6NUM6 668 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 KRT26Q7Z3Y9 468 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 POTEDQ86YR6 584 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 ANKRD18AQ8IVF6 992 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 BCAS4Q8TDM0 211 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 GPKOWQ92917 476 aaPredicted RBP eCLIP22.97■■□□□ 1.27
CLPB-202ENST00000340729 MAST2Q6P0Q8 1798 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 COL4A1P02462 1669 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 ANKRD65E5RJM6 399 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 CCDC84Q86UT8 332 aaPredicted RBP22.97■■□□□ 1.27
CLPB-202ENST00000340729 RASGRP4Q8TDF6 673 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 RRP36Q96EU6 259 aaKnown RBP22.97■■□□□ 1.27
CLPB-202ENST00000340729 EDEM3Q9BZQ6 932 aa22.97■■□□□ 1.27
CLPB-202ENST00000340729 ZEB2O60315 1214 aa22.96■■□□□ 1.27
CLPB-202ENST00000340729 HSF2BPO75031 334 aa22.96■■□□□ 1.27
CLPB-202ENST00000340729 ERLIN2O94905 339 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms