RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 CABP7Q86V35 215 aa18.35■□□□□ 0.53
HPS1-202ENST00000338546 POTEDQ86YR6 584 aa18.35■□□□□ 0.53
HPS1-202ENST00000338546 CRYGNQ8WXF5 182 aa18.35■□□□□ 0.53
HPS1-202ENST00000338546 ANO3Q9BYT9 981 aa18.35■□□□□ 0.53
HPS1-202ENST00000338546 GTPBP4Q9BZE4 634 aaKnown RBP18.35■□□□□ 0.53
HPS1-202ENST00000338546 DDX25Q9UHL0 483 aaKnown RBP18.35■□□□□ 0.53
HPS1-202ENST00000338546 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
HPS1-202ENST00000338546 MSNP26038 577 aaKnown RBP18.34■□□□□ 0.53
HPS1-202ENST00000338546 AFMP43652 599 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP14P54578 494 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 ENOX1Q8TC92 643 aaKnown RBP18.34■□□□□ 0.53
HPS1-202ENST00000338546 KBTBD4Q9NVX7 518 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 PITPNM2Q9BZ72 1349 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 SBF1O95248 1867 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 SPDYE3A6NKU9 549 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L15C9J2P7 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L13C9JLJ4 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L11C9JVI0 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L18D6R9N7 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L22D6RA61 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L17D6RBQ6 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L19D6RCP7 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L20D6RJB6 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 TDP2O95551 362 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L24Q0WX57 530 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 KARSQ15046 597 aaKnown RBP18.34■□□□□ 0.53
HPS1-202ENST00000338546 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 GRAMD1CQ8IYS0 662 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 RASSF8Q8NHQ8 419 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 CALML4Q96GE6 196 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 WDR18Q9BV38 432 aa18.34■□□□□ 0.53
HPS1-202ENST00000338546 MRPL11Q9Y3B7 192 aaKnown RBP18.34■□□□□ 0.53
HPS1-202ENST00000338546 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.53
HPS1-202ENST00000338546 ABCB11O95342 1321 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 TBX3O15119 743 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 SLC37A4O43826 429 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 SREBF1P36956 1147 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 TECP42680 631 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 NAALADL2Q58DX5 795 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 ISM2Q6H9L7 571 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 FEZ1Q99689 392 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 FHDC1Q9C0D6 1143 aaPredicted RBP18.33■□□□□ 0.52
HPS1-202ENST00000338546 LRWD1Q9UFC0 647 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 STK24Q9Y6E0 443 aa18.33■□□□□ 0.52
HPS1-202ENST00000338546 CYP3A4P08684 503 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 FDX1P10109 184 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 HOXA7P31268 230 aaPredicted RBP18.32■□□□□ 0.52
HPS1-202ENST00000338546 CIITAP33076 1130 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 TXKP42681 527 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 AMPD3Q01432 767 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 DHX8Q14562 1220 aaKnown RBP18.32■□□□□ 0.52
HPS1-202ENST00000338546 KCNB1Q14721 858 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 Q4G0T1 1027 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 ANGEL2Q5VTE6 544 aaKnown RBP18.32■□□□□ 0.52
HPS1-202ENST00000338546 SLFN12Q8IYM2 578 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 SAMD3Q8N6K7 520 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 MTRQ99707 1265 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 AS3MTQ9HBK9 375 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 STK17AQ9UEE5 414 aa18.32■□□□□ 0.52
HPS1-202ENST00000338546 CLCN1P35523 988 aa18.31■□□□□ 0.52
HPS1-202ENST00000338546 USH1GQ495M9 461 aa18.31■□□□□ 0.52
HPS1-202ENST00000338546 NBPF12Q5TAG4 269 aaPredicted RBP18.31■□□□□ 0.52
HPS1-202ENST00000338546 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
HPS1-202ENST00000338546 PRPF38AQ8NAV1 312 aaKnown RBP18.31■□□□□ 0.52
HPS1-202ENST00000338546 KIFC2Q96AC6 838 aa18.31■□□□□ 0.52
HPS1-202ENST00000338546 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
HPS1-202ENST00000338546 OPLAHO14841 1288 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 CBFA2T2O43439 604 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 CDC25AP30304 524 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 ARHGAP4P98171 946 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 DOCK1Q14185 1865 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 SUPT20HL1Q3ZLR7 823 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 HAS1Q92839 578 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 MMTAG2Q9BU76 263 aaKnown RBP18.3■□□□□ 0.52
HPS1-202ENST00000338546 GLIS2Q9BZE0 524 aaPredicted RBP18.3■□□□□ 0.52
HPS1-202ENST00000338546 LRRC27Q9C0I9 530 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 TTC12Q9H892 705 aaPredicted RBP18.3■□□□□ 0.52
HPS1-202ENST00000338546 EHMT1Q9H9B1 1298 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 KCNMB3Q9NPA1 279 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 PP2D1A8MPX8 630 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 RPN1P04843 607 aaKnown RBP18.3■□□□□ 0.52
HPS1-202ENST00000338546 PLCG1P19174 1290 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 ZNF658Q5TYW1 1059 aaPredicted RBP18.3■□□□□ 0.52
HPS1-202ENST00000338546 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 DRC7Q8IY82 874 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 C7orf25Q9BPX7 421 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 SLF1Q9BQI6 1058 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 HSD3B7Q9H2F3 369 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 PCDHA12Q9UN75 941 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
HPS1-202ENST00000338546 GCOM1H8Y6P7 765 aaPredicted RBP18.29■□□□□ 0.52
HPS1-202ENST00000338546 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
HPS1-202ENST00000338546 MARCH6O60337 910 aa18.29■□□□□ 0.52
HPS1-202ENST00000338546 ICAM1P05362 532 aa18.29■□□□□ 0.52
HPS1-202ENST00000338546 POLR2MP0CAP2 368 aa18.29■□□□□ 0.52
HPS1-202ENST00000338546 SNAP25P60880 206 aa18.29■□□□□ 0.52
HPS1-202ENST00000338546 CUL4BQ13620 913 aa18.29■□□□□ 0.52
HPS1-202ENST00000338546 CCDC47Q96A33 483 aaKnown RBP18.29■□□□□ 0.52
HPS1-202ENST00000338546 FAM20AQ96MK3 541 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms