RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 PPP1R12AO14974 1030 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 GYPCP04921 128 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 CDC25CP30307 473 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 ZNF365Q70YC5 407 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 WHAMMQ8TF30 809 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 ABTB1Q969K4 478 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 INTUQ9ULD6 942 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 A2ML1A8K2U0 1454 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 LMTK3Q96Q04 1460 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 TBCAO75347 108 aaKnown RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 PRPHP41219 470 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 NR1I3Q14994 352 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 RAB3IPQ96QF0 476 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 CTTNBP2NLQ9P2B4 639 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 DMGDHQ9UI17 866 aaKnown RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 TUBE1Q9UJT0 475 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 CPSF1Q10570 1443 aaKnown RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 A0A1B0GTH6 734 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 EEF2P13639 858 aaKnown RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 FDPSP14324 419 aaKnown RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 PHKG2P15735 406 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 RFC4P35249 363 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 PLS1Q14651 629 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 HERC4Q5GLZ8 1057 aaPredicted RBP14.53□□□□□ -0.08
COL2A1-201ENST00000337299 PLVAPQ9BX97 442 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 OSBPL1AQ9BXW6 950 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 BABAM1Q9NWV8 329 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 TBK1Q9UHD2 729 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 ADAMTS1Q9UHI8 967 aa14.53□□□□□ -0.08
COL2A1-201ENST00000337299 IGSF1Q8N6C5 1336 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 PCDH11XQ9BZA7 1347 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 PCDH11YQ9BZA8 1340 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 MAP2K7O14733 419 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 SETSIPP0DME0 302 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 EEF1GP26641 437 aaKnown RBP14.52□□□□□ -0.08
COL2A1-201ENST00000337299 CARSP49589 748 aaKnown RBP14.52□□□□□ -0.08
COL2A1-201ENST00000337299 PTPN12Q05209 780 aaKnown RBP14.52□□□□□ -0.08
COL2A1-201ENST00000337299 INF2Q27J81 1249 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 OXER1Q8TDS5 423 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 RWDD2AQ9UIY3 292 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 TSPY3P0CV98 308 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 TSPY8P0CW00 308 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 CALM1P0DP23 149 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 CALM2P0DP24 149 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 CALM3P0DP25 149 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 CDC27P30260 824 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 GRIN1Q05586 938 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 CETN1Q12798 172 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 HHATQ5VTY9 493 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 PIK3R5Q8WYR1 880 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 NAP1L3Q99457 506 aaPredicted RBP14.52□□□□□ -0.08
COL2A1-201ENST00000337299 AMFRQ9UKV5 643 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 IQGAP3Q86VI3 1631 aa14.52□□□□□ -0.08
COL2A1-201ENST00000337299 SETD1BQ9UPS6 1966 aaKnown RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 SPDYE3A6NKU9 549 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 FLOT1O75955 427 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 ATP5DP30049 168 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 LRRC41Q15345 812 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 TMC4Q7Z404 712 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 GPKOWQ92917 476 aaPredicted RBP eCLIP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 SGSM3Q96HU1 749 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 LRRC27Q9C0I9 530 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 NUCKS1Q9H1E3 243 aaKnown RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 DNAJC17Q9NVM6 304 aaKnown RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 LRRC14Q15048 493 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 ZNF658Q5TYW1 1059 aaPredicted RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 RAB3IL1Q8TBN0 382 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 CYFIP2Q96F07 1278 aa14.52□□□□□ -0.09
COL2A1-201ENST00000337299 DDX47Q9H0S4 455 aaKnown RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 ADD3Q9UEY8 706 aaKnown RBP14.52□□□□□ -0.09
COL2A1-201ENST00000337299 AATKQ6ZMQ8 1374 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 TNKSO95271 1327 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 TNFAIP3P21580 790 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 ERFP50548 548 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 FAM47AQ5JRC9 791 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 RPGRQ92834 1020 aaKnown RBP14.51□□□□□ -0.09
COL2A1-201ENST00000337299 FOXP1Q9H334 677 aaPredicted RBP14.51□□□□□ -0.09
COL2A1-201ENST00000337299 TARSL2A2RTX5 802 aaKnown RBP14.51□□□□□ -0.09
COL2A1-201ENST00000337299 PALMO75781 387 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 PPP2R2AP63151 447 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 PDE1CQ14123 709 aaPredicted RBP14.51□□□□□ -0.09
COL2A1-201ENST00000337299 FAM47EQ6ZV65 393 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 ARMC9Q7Z3E5 817 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 SCYL3Q8IZE3 742 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 IFNL3Q8IZI9 196 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 KIF2BQ8N4N8 673 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 SDR42E1Q8WUS8 393 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 PLBD2Q8NHP8 589 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 MCM9Q9NXL9 1143 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 DUSP10Q9Y6W6 482 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 ARHGAP31Q2M1Z3 1444 aa14.51□□□□□ -0.09
COL2A1-201ENST00000337299 ANO9A1A5B4 782 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 TECP42680 631 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 PRCPP42785 496 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 ANKRD20A3Q5VUR7 823 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 FYB2Q5VWT5 728 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 SNX29Q8TEQ0 813 aa14.5□□□□□ -0.09
COL2A1-201ENST00000337299 ZSWIM5Q9P217 1185 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms