RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SRGAP1Q7Z6B7 1085 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 CTNNBL1Q8WYA6 563 aaPredicted RBP9.15□□□□□ -0.95
HPS4-201ENST00000336873 ABHD10Q9NUJ1 306 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 TMEM51Q9NW97 253 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.95
HPS4-201ENST00000336873 ERCC5P28715 1186 aaPredicted RBP9.14□□□□□ -0.95
HPS4-201ENST00000336873 VSNL1P62760 191 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 GSTO1P78417 241 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 PKN1Q16512 942 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 TPH2Q8IWU9 490 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 ATP8A2Q9NTI2 1148 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 JCADQ9P266 1359 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 E9PMD0 336 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 RNF225M0QZC1 329 aaPredicted RBP9.14□□□□□ -0.95
HPS4-201ENST00000336873 ATP1A1P05023 1023 aaKnown RBP9.14□□□□□ -0.95
HPS4-201ENST00000336873 ADCY7P51828 1080 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
HPS4-201ENST00000336873 VGLL2Q8N8G2 317 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 HPSEQ9Y251 543 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 FANCGO15287 622 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 PHLDB2Q86SQ0 1253 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 GBP3Q9H0R5 595 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 PSTPIP2Q9H939 334 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 PCDHA1Q9Y5I3 950 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.14□□□□□ -0.95
HPS4-201ENST00000336873 CDHR2Q9BYE9 1310 aa9.14□□□□□ -0.95
HPS4-201ENST00000336873 CACNA1FO60840 1977 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 TBCAO75347 108 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 TADA3O75528 432 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 PFKFB3Q16875 520 aaPredicted RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 ZNF658Q5TYW1 1059 aaPredicted RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 ANKRD40Q6AI12 368 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 CCDC84Q86UT8 332 aaPredicted RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 PHF20Q9BVI0 1012 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 NHEJ1Q9H9Q4 299 aaPredicted RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 ZNF446Q9NWS9 450 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 XDHP47989 1333 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 ABCC12Q96J65 1359 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 KDM3BQ7LBC6 1761 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 GOLGA6L10A6NI86 522 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 TCP10L2B9ZVM9 353 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 CLGNO14967 610 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 CEP104O60308 925 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 GCNT3O95395 438 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 FGFR2P21802 821 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 EIF4A3P38919 411 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 IFFO1Q0D2I5 559 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 NR1I3Q14994 352 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 MAP9Q49MG5 647 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 MIGA2Q7L4E1 593 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 GPBP1Q86WP2 473 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 CCDC25Q86WR0 208 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 FAM114A1Q8IWE2 563 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 PIGOQ8TEQ8 1089 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 KIFC2Q96AC6 838 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 RIOK1Q9BRS2 568 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 FAM204AQ9H8W3 233 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 ADD3Q9UEY8 706 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 BICDL2A1A5D9 508 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 H7C1D1 291 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 SERPINB2P05120 415 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 CYP2J2P51589 502 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 GFPT1Q06210 699 aaPredicted RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 KIAA0753Q2KHM9 967 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 MICALL1Q8N3F8 863 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 FAM133AQ8N9E0 248 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 TRIML1Q8N9V2 468 aa9.13□□□□□ -0.95
HPS4-201ENST00000336873 MRRFQ96E11 262 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 LSM14BQ9BX40 385 aaKnown RBP9.13□□□□□ -0.95
HPS4-201ENST00000336873 ERVK-24P63145 666 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 KLHL30Q0D2K2 578 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 CNNM4Q6P4Q7 775 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 DDX60Q8IY21 1712 aaKnown RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 USP17L10C9JJH3 530 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 DDAH1O94760 285 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 KRT13P13646 458 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 GABPB1Q06547 395 aaPredicted RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 WDR78Q5VTH9 848 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 C8orf74Q6P047 294 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 NFRKBQ6P4R8 1299 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 TRIM65Q6PJ69 517 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 MB21D1Q8N884 522 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 P2RX5Q93086 422 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 MS4A14Q96JA4 679 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 PNKPQ96T60 521 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 PLA2G12BQ9BX93 195 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 CHORDC1Q9UHD1 332 aaPredicted RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 DDX25Q9UHL0 483 aaKnown RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 PCNTO95613 3336 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 PHLPP2Q6ZVD8 1323 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 PPP1R3GB7ZBB8 358 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 BACH1O14867 736 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 LRRN2O75325 713 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 AKR1B1P15121 316 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 DNM2P50570 870 aa9.12□□□□□ -0.95
HPS4-201ENST00000336873 MRPL12P52815 198 aaKnown RBP9.12□□□□□ -0.95
HPS4-201ENST00000336873 CASP8Q14790 479 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms