RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 CDC25AP30304 524 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 SEPT2Q15019 361 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 TMEM266Q2M3C6 531 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 PPP4R3AQ6IN85 833 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 BRWD3Q6RI45 1802 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 ARHGAP27Q6ZUM4 889 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 TBCKQ8TEA7 893 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 LRRC15Q8TF66 581 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 PIGSQ96S52 555 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 MMTAG2Q9BU76 263 aaKnown RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 GLT8D2Q9H1C3 349 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 EHD4Q9H223 541 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 KIF13BQ9NQT8 1826 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 POLLQ9UGP5 575 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 LUC7L2Q9Y383 392 aaKnown RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 EPN1Q9Y6I3 576 aaPredicted RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 POLRMTO00411 1230 aaKnown RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 NDUFA10O95299 355 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 ADCY7P51828 1080 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 PDE4DQ08499 809 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 PSMD2Q13200 908 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 LETM2Q2VYF4 491 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 GPATCH4Q5T3I0 446 aaKnown RBP12.03□□□□□ -0.48
CCDC172-201ENST00000333254 CENPPQ6IPU0 288 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 USP17L2Q6R6M4 530 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 UNC13DQ70J99 1090 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 CCDC170Q8IYT3 715 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 EHBP1Q8NDI1 1231 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 CPLX3Q8WVH0 158 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 RIC8AQ9NPQ8 531 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 RAB21Q9UL25 225 aa12.03□□□□□ -0.48
CCDC172-201ENST00000333254 ADAMTSL1Q8N6G6 1762 aa12.02□□□□□ -0.48
CCDC172-201ENST00000333254 PNMA6FA0A0J9YX94 578 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 TTC26A0AVF1 554 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 TRIM49BA6NDI0 452 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 UBAP1LF5GYI3 381 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 PSMD14O00487 310 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 FGFR1OPO95684 399 aaKnown RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 GOLGA8HP0CJ92 632 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 HNRNPH3P31942 346 aaKnown RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 CLK2P49760 499 aaKnown RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 PMS1P54277 932 aaKnown RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 CHMP4BP1P59074 171 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 KRT83P78385 493 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 ZBED6P86452 979 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 ZNF543Q08ER8 600 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 TERF2Q15554 542 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 TSR1Q2NL82 804 aaKnown RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 SLC4A8Q2Y0W8 1093 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 ZNF569Q5MCW4 686 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 CC2D1AQ6P1N0 951 aaPredicted RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 HHIPL2Q6UWX4 724 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 SV2BQ7L1I2 683 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 CSGALNACT2Q8N6G5 542 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 GPR101Q96P66 508 aaPredicted RBP12.02□□□□□ -0.49
CCDC172-201ENST00000333254 TUBGCP2Q9BSJ2 902 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 LZTFL1Q9NQ48 299 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
CCDC172-201ENST00000333254 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 RNF225M0QZC1 329 aaPredicted RBP12.01□□□□□ -0.49
CCDC172-201ENST00000333254 TTLL1O95922 423 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 CYLC1P35663 651 aaPredicted RBP12.01□□□□□ -0.49
CCDC172-201ENST00000333254 FKBP1AP62942 108 aaKnown RBP12.01□□□□□ -0.49
CCDC172-201ENST00000333254 ASIC1P78348 528 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 AMPD2Q01433 879 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 LRRC63Q05C16 580 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 DDR1Q08345 913 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 EHHADHQ08426 723 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 GRB10Q13322 594 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 CALCRLQ16602 461 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 TMEM119Q4V9L6 283 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 HYIQ5T013 277 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 TEX2Q8IWB9 1127 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 SLC35F6Q8N357 371 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 ACRBPQ8NEB7 543 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 CCDC17Q96LX7 622 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 MRIQ9BWK5 157 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 EDEM3Q9BZQ6 932 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 ARFGAP3Q9NP61 516 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 BLOC1S4Q9NUP1 217 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 PSME4Q14997 1843 aa12.01□□□□□ -0.49
CCDC172-201ENST00000333254 EIF3CLB5ME19 914 aaKnown RBP12□□□□□ -0.49
CCDC172-201ENST00000333254 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
CCDC172-201ENST00000333254 TEX35Q5T0J7 233 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 MCTP2Q6DN12 878 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 WDR59Q6PJI9 974 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 SLC51AQ86UW1 340 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 LARP4BQ92615 738 aaKnown RBP12□□□□□ -0.49
CCDC172-201ENST00000333254 RPGRIP1Q96KN7 1286 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 CNOT6LQ96LI5 555 aaKnown RBP12□□□□□ -0.49
CCDC172-201ENST00000333254 EIF3CQ99613 913 aaKnown RBP12□□□□□ -0.49
CCDC172-201ENST00000333254 PRDM10Q9NQV6 1147 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 ZNHIT6Q9NWK9 470 aaKnown RBP12□□□□□ -0.49
CCDC172-201ENST00000333254 LRWD1Q9UFC0 647 aa12□□□□□ -0.49
CCDC172-201ENST00000333254 SERPINB13Q9UIV8 391 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms