RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PSMA7O14818 248 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
DDX28-201ENST00000332395 PMS1P54277 932 aaKnown RBP19.53■□□□□ 0.72
DDX28-201ENST00000332395 TMEM266Q2M3C6 531 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 CPLX3Q8WVH0 158 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 MKL1Q969V6 931 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 TRIM34Q9BYJ4 488 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 KANSL2Q9H9L4 492 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 L2HGDHQ9H9P8 463 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 NYAP2Q9P242 653 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 LRWD1Q9UFC0 647 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 MFAP3LO75121 409 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 GYPCP04921 128 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 RXRBP28702 533 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 MRPL12P52815 198 aaKnown RBP19.53■□□□□ 0.72
DDX28-201ENST00000332395 AMPD3Q01432 767 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 NAA30Q147X3 362 aaPredicted RBP19.53■□□□□ 0.72
DDX28-201ENST00000332395 IRF2BP1Q8IU81 584 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 CREBRFQ8IUR6 639 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 C7orf43Q8WVR3 580 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 CCDC47Q96A33 483 aaKnown RBP19.53■□□□□ 0.72
DDX28-201ENST00000332395 DNAI1Q9UI46 699 aa19.53■□□□□ 0.72
DDX28-201ENST00000332395 GOLGA6L9A6NEM1 432 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 RAD21O60216 631 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 CASP14P31944 242 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 ASIC1P78348 528 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 PPP4R3AQ6IN85 833 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 TATDN1Q6P1N9 297 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 NAA15Q9BXJ9 866 aaKnown RBP19.52■□□□□ 0.72
DDX28-201ENST00000332395 EXOC1Q9NV70 894 aa19.52■□□□□ 0.72
DDX28-201ENST00000332395 SPDYE4A6NLX3 237 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 SLU7O95391 586 aaKnown RBP19.51■□□□□ 0.71
DDX28-201ENST00000332395 SLC1A4P43007 532 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 PDE4DQ08499 809 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 GRB10Q13322 594 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 AEBP2Q6ZN18 517 aaPredicted RBP19.51■□□□□ 0.71
DDX28-201ENST00000332395 CNGA4Q8IV77 575 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 DCAF4Q8WV16 495 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 RAB34Q9BZG1 259 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 PSTPIP2Q9H939 334 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.51■□□□□ 0.71
DDX28-201ENST00000332395 SOWAHDA6NJG2 315 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 SLFN13Q68D06 897 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 ERO1AQ96HE7 468 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 DHTKD1Q96HY7 919 aaPredicted RBP19.51■□□□□ 0.71
DDX28-201ENST00000332395 TRIM47Q96LD4 638 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 THAP9Q9H5L6 903 aa19.51■□□□□ 0.71
DDX28-201ENST00000332395 POTEMA6NI47 508 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 TPM1P09493 284 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 FXR1P51114 621 aaKnown RBP eCLIP19.5■□□□□ 0.71
DDX28-201ENST00000332395 PDIA5Q14554 519 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 MTF1Q14872 753 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 SEPT2Q15019 361 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 SLC15A2Q16348 729 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 TTI2Q6NXR4 508 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 FEZ1Q99689 392 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 DESI2Q9BSY9 194 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 STK17AQ9UEE5 414 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 EEF1GP26641 437 aaKnown RBP19.5■□□□□ 0.71
DDX28-201ENST00000332395 ICA1Q05084 483 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 STK4Q13043 487 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 QRICH1Q2TAL8 776 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 TMEM179Q6ZVK1 233 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 SV2BQ7L1I2 683 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 SIAH1Q8IUQ4 282 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 CCDC51Q96ER9 411 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 CDK5RAP3Q96JB5 506 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 PNMA5Q96PV4 448 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 SRRTQ9BXP5 876 aaKnown RBP19.5■□□□□ 0.71
DDX28-201ENST00000332395 TDRD3Q9H7E2 651 aaKnown RBP19.5■□□□□ 0.71
DDX28-201ENST00000332395 BLOC1S4Q9NUP1 217 aa19.5■□□□□ 0.71
DDX28-201ENST00000332395 DDX25Q9UHL0 483 aaKnown RBP19.5■□□□□ 0.71
DDX28-201ENST00000332395 GOLGB1Q14789 3259 aaKnown RBP19.5■□□□□ 0.71
DDX28-201ENST00000332395 FANCGO15287 622 aa19.49■□□□□ 0.71
DDX28-201ENST00000332395 MYH7BA7E2Y1 1941 aa19.49■□□□□ 0.71
DDX28-201ENST00000332395 ATRNL1Q5VV63 1379 aa19.49■□□□□ 0.71
DDX28-201ENST00000332395 GDF11O95390 407 aa19.49■□□□□ 0.71
DDX28-201ENST00000332395 UBXN1Q04323 297 aa19.49■□□□□ 0.71
DDX28-201ENST00000332395 RAD9BQ6WBX8 426 aa19.49■□□□□ 0.71
DDX28-201ENST00000332395 ATF5Q9Y2D1 282 aaPredicted RBP19.49■□□□□ 0.71
DDX28-201ENST00000332395 CCDC175P0C221 793 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 FCER1AP12319 257 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 GCFC2P16383 781 aaKnown RBP19.48■□□□□ 0.71
DDX28-201ENST00000332395 CCNE1P24864 410 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 TRIM14Q14142 442 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 CDC37Q16543 378 aaPredicted RBP19.48■□□□□ 0.71
DDX28-201ENST00000332395 ABCB5Q2M3G0 1257 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 CC2D2BQ6DHV5 1058 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 SUPT20HQ8NEM7 779 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 SNX29Q8TEQ0 813 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 NOC3LQ8WTT2 800 aaKnown RBP19.48■□□□□ 0.71
DDX28-201ENST00000332395 LARP4BQ92615 738 aaKnown RBP19.48■□□□□ 0.71
DDX28-201ENST00000332395 P2RX5Q93086 422 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 GLT8D2Q9H1C3 349 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 PCDHA1Q9Y5I3 950 aa19.48■□□□□ 0.71
DDX28-201ENST00000332395 BICDL2A1A5D9 508 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 YDJCA8MPS7 323 aa19.47■□□□□ 0.71
DDX28-201ENST00000332395 PPIP5K2O43314 1243 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms