RNA–Protein interactions for RNA: ENST00000330459.7

KPNA2-201, Transcript of karyopherin subunit alpha 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA2, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA2-201ENST00000330459 KLRC3Q07444 240 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 HSP90AA2PQ14568 343 aaPredicted RBP10.85□□□□□ -0.67
KPNA2-201ENST00000330459 UBE2SQ16763 222 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 QRICH1Q2TAL8 776 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 TCP11X2Q5H9J9 407 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
KPNA2-201ENST00000330459 MTERF4Q7Z6M4 381 aaKnown RBP10.85□□□□□ -0.67
KPNA2-201ENST00000330459 RTKN2Q8IZC4 609 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 TTLL6Q8N841 843 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 LRRC15Q8TF66 581 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 PANX2Q96RD6 677 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 MAP7D2Q96T17 732 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 TRIM9Q9C026 710 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 ATRNL1Q5VV63 1379 aa10.85□□□□□ -0.67
KPNA2-201ENST00000330459 KCNJ18B7U540 433 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 N4BP3O15049 544 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 PPP1R2P41236 205 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 KCNJ12Q14500 433 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 KRT31Q15323 416 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 CCDC93Q567U6 631 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 SV2BQ7L1I2 683 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 GMCL1P1Q8NEA9 526 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 DHTKD1Q96HY7 919 aaPredicted RBP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 EXOC1Q9NV70 894 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 STK17AQ9UEE5 414 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 DDX25Q9UHL0 483 aaKnown RBP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 PCDHA1Q9Y5I3 950 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 GDF11O95390 407 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 COPB1P53618 953 aaKnown RBP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 PDE4DQ08499 809 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 SHROOM1Q2M3G4 852 aaPredicted RBP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 MCTP2Q6DN12 878 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 RSBN1LQ6PCB5 846 aaPredicted RBP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 GMCL1Q96IK5 515 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 CDK5RAP3Q96JB5 506 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 TMOD2Q9NZR1 351 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.84□□□□□ -0.67
KPNA2-201ENST00000330459 ITIH6Q6UXX5 1313 aa10.84□□□□□ -0.67
KPNA2-201ENST00000330459 COL2A1P02458 1487 aaPredicted RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 MARCH6O60337 910 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 TPM1P09493 284 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 CCT6AP40227 531 aaKnown RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 USP11P51784 963 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 ASIC1P78348 528 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 RBL2Q08999 1139 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 GRB10Q13322 594 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 CDC37Q16543 378 aaPredicted RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 KRT79Q5XKE5 535 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 CREBRFQ8IUR6 639 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 NOC3LQ8WTT2 800 aaKnown RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 TSC1Q92574 1164 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 CSRNP1Q96S65 589 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 PSMD1Q99460 953 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 NAA15Q9BXJ9 866 aaKnown RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 LRRC27Q9C0I9 530 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 VPS16Q9H269 839 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 PDCL3Q9H2J4 239 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 THAP9Q9H5L6 903 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 HERC5Q9UII4 1024 aaKnown RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 HDAC9Q9UKV0 1011 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 SIPA1L1O43166 1804 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 ZNF646O15015 1829 aaPredicted RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 GOLGA6L9A6NEM1 432 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 GH2P01242 217 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 VIL1P09327 827 aaKnown RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 EEF1GP26641 437 aaKnown RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 SYCP1Q15431 976 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 CNNM4Q6P4Q7 775 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 POTEAQ6S8J7 498 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 REXO1L1PQ8IX06 675 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 OGFOD1Q8N543 542 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 CCDC51Q96ER9 411 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 PNMA5Q96PV4 448 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 AMNQ9BXJ7 453 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 RGS17Q9UGC6 210 aaPredicted RBP10.83□□□□□ -0.68
KPNA2-201ENST00000330459 SYNPO2Q9UMS6 1093 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 PCDHA12Q9UN75 941 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 PPP2R2CQ9Y2T4 447 aa10.83□□□□□ -0.68
KPNA2-201ENST00000330459 BICDL2A1A5D9 508 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 TRIM49BA6NDI0 452 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 SPDYE2BA6NHP3 402 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L15C9J2P7 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L13C9JLJ4 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L11C9JVI0 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L18D6R9N7 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L22D6RA61 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L17D6RBQ6 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L19D6RCP7 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L20D6RJB6 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 NDUFB10O96000 172 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 SPDYE6P0CI01 402 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 PMS1P54277 932 aaKnown RBP10.82□□□□□ -0.68
KPNA2-201ENST00000330459 ETF1P62495 437 aaKnown RBP10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L24Q0WX57 530 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 DLGAP5Q15398 846 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 COBLL1Q53SF7 1204 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 USP17L6PQ6QN14 398 aa10.82□□□□□ -0.68
KPNA2-201ENST00000330459 SYT10Q6XYQ8 523 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms