RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 CCDC17Q96LX7 622 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 RGPD2P0DJD1 1756 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 TCHHQ07283 1943 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 BUB1O43683 1085 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 DDR1Q08345 913 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
SYNM-201ENST00000328642 SP8Q8IXZ3 490 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 OR8K1Q8NGG5 319 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 GOPCQ9HD26 462 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 WDR19Q8NEZ3 1342 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 STK36Q9NRP7 1315 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 IKBKBO14920 756 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 KRT13P13646 458 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 MAGEA1P43355 309 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 CTTNQ14247 550 aaKnown RBP17.81■□□□□ 0.44
SYNM-201ENST00000328642 KRT31Q15323 416 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 CYP26C1Q6V0L0 522 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 SUPT20HQ8NEM7 779 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 PHF20Q9BVI0 1012 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 ATP6V0A2Q9Y487 856 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 GRM4Q14833 912 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
SYNM-201ENST00000328642 ENOX1Q8TC92 643 aaKnown RBP17.81■□□□□ 0.44
SYNM-201ENST00000328642 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 TACC1O75410 805 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 TRAPPC10P48553 1259 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 CETN1Q12798 172 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 SPTLC3Q9NUV7 552 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 BARHL2Q9NY43 387 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 EXOC3O60645 756 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 KRT83P78385 493 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 CHURC1Q8WUH1 139 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 IFT81Q8WYA0 676 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 JAKMIP2Q96AA8 810 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 AGXT2Q9BYV1 514 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 MTMR4Q9NYA4 1195 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 CNTNAP5Q8WYK1 1306 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 EIF2AK2P19525 551 aaKnown RBP17.8■□□□□ 0.44
SYNM-201ENST00000328642 PTPAQ15257 358 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 SEC23AQ15436 765 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 TAX1BP1Q86VP1 789 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 TRIML1Q8N9V2 468 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 ZNF341Q9BYN7 854 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 GTPBP4Q9BZE4 634 aaKnown RBP17.8■□□□□ 0.44
SYNM-201ENST00000328642 PCDHA6Q9UN73 950 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 PCDHA8Q9Y5H6 950 aa17.8■□□□□ 0.44
SYNM-201ENST00000328642 POTEB3A0JP26 581 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 POTECB2RU33 542 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 ARMCX5Q6P1M9 558 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 POTEBQ6S5H4 581 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 VSTM4Q8IW00 320 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 RABEP2Q9H5N1 569 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 POLR2FP61218 127 aaKnown RBP17.79■□□□□ 0.44
SYNM-201ENST00000328642 EAPPQ56P03 285 aaPredicted RBP17.79■□□□□ 0.44
SYNM-201ENST00000328642 CCDC127Q96BQ5 260 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 CCDC113Q9H0I3 377 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 BHMT2Q9H2M3 363 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 GCOM1H8Y6P7 765 aaPredicted RBP17.79■□□□□ 0.44
SYNM-201ENST00000328642 ZMYND10O75800 440 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 ADAM9Q13443 819 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 SLC27A3Q5K4L6 730 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 STXBP4Q6ZWJ1 553 aa17.79■□□□□ 0.44
SYNM-201ENST00000328642 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.79■□□□□ 0.44
SYNM-201ENST00000328642 PNMA6FA0A0J9YX94 578 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 H7C1D1 291 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 TOGARAM2Q6ZUX3 1019 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 FOXP4Q8IVH2 680 aaPredicted RBP17.78■□□□□ 0.44
SYNM-201ENST00000328642 ANO3Q9BYT9 981 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 LRCH2Q5VUJ6 765 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 TMTC1Q8IUR5 882 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 GOLGA1Q92805 767 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 LSM14BQ9BX40 385 aaKnown RBP17.78■□□□□ 0.44
SYNM-201ENST00000328642 IL17RBQ9NRM6 502 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 FUCA2Q9BTY2 467 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 SH2D4AQ9H788 454 aa17.78■□□□□ 0.44
SYNM-201ENST00000328642 POTEFA5A3E0 1075 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
SYNM-201ENST00000328642 PRPF6O94906 941 aaKnown RBP17.77■□□□□ 0.44
SYNM-201ENST00000328642 POTEIP0CG38 1075 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 ABCB4P21439 1286 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 ERCC5P28715 1186 aaPredicted RBP17.77■□□□□ 0.44
SYNM-201ENST00000328642 MKRN3Q13064 507 aaKnown RBP17.77■□□□□ 0.44
SYNM-201ENST00000328642 CCDC93Q567U6 631 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 ZNF658Q5TYW1 1059 aaPredicted RBP17.77■□□□□ 0.44
SYNM-201ENST00000328642 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 POTEEQ6S8J3 1075 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 DDX12PQ92771 950 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 SWAP70Q9UH65 585 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 FAM205AQ6ZU69 1335 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 STAT2P52630 851 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 SYDE2Q5VT97 1194 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 ZFPM1Q8IX07 1006 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 FAM107BQ9H098 131 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.44
SYNM-201ENST00000328642 PCIF1Q9H4Z3 704 aa17.77■□□□□ 0.44
SYNM-201ENST00000328642 CXCR5P32302 372 aa17.77■□□□□ 0.43
SYNM-201ENST00000328642 LMAN1P49257 510 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms