RNA–Protein interactions for RNA: ENST00000322326.12

IFT20-201, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 820 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-201ENST00000322326 HSP90AA1P07900 732 aaKnown RBP18.48■□□□□ 0.55
IFT20-201ENST00000322326 TROAPQ12815 778 aa18.48■□□□□ 0.55
IFT20-201ENST00000322326 RTN1Q16799 776 aa18.48■□□□□ 0.55
IFT20-201ENST00000322326 ZNF792Q3KQV3 632 aa18.48■□□□□ 0.55
IFT20-201ENST00000322326 CPLX2Q6PUV4 134 aaKnown RBP18.48■□□□□ 0.55
IFT20-201ENST00000322326 RAB11FIP4Q86YS3 637 aa18.48■□□□□ 0.55
IFT20-201ENST00000322326 GMCL1P1Q8NEA9 526 aa18.48■□□□□ 0.55
IFT20-201ENST00000322326 MAFAQ8NHW3 353 aaPredicted RBP18.48■□□□□ 0.55
IFT20-201ENST00000322326 RBM28Q9NW13 759 aaKnown RBP18.48■□□□□ 0.55
IFT20-201ENST00000322326 CNPY2Q9Y2B0 182 aa18.48■□□□□ 0.55
IFT20-201ENST00000322326 RAG1P15918 1043 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 RXRAP19793 462 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 CCT2P78371 535 aaKnown RBP18.47■□□□□ 0.55
IFT20-201ENST00000322326 GRM4Q14833 912 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 FAM83BQ5T0W9 1011 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 CCDC83Q8IWF9 413 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 CCDC144CPQ8IYA2 1237 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 FANCBQ8NB91 859 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 RNPC3Q96LT9 517 aaKnown RBP18.47■□□□□ 0.55
IFT20-201ENST00000322326 ZNF214Q9UL59 606 aaPredicted RBP18.47■□□□□ 0.55
IFT20-201ENST00000322326 MTMR7Q9Y216 660 aa18.47■□□□□ 0.55
IFT20-201ENST00000322326 TMEM265A0A087WTH1 108 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 A0A1W2PQ45 241 aaPredicted RBP18.46■□□□□ 0.55
IFT20-201ENST00000322326 A0A1W2PQY0 241 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 CPLX1O14810 134 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 KIAA0355O15063 1070 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 ZNF865P0CJ78 1059 aaPredicted RBP18.46■□□□□ 0.55
IFT20-201ENST00000322326 SCRN1Q12765 414 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 CUL4AQ13619 759 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 MSL3Q8N5Y2 521 aaKnown RBP18.46■□□□□ 0.55
IFT20-201ENST00000322326 NECAB1Q8N987 351 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 DCAF4Q8WV16 495 aa18.46■□□□□ 0.55
IFT20-201ENST00000322326 TSEN34Q9BSV6 310 aaKnown RBP18.46■□□□□ 0.55
IFT20-201ENST00000322326 F5H6K3 240 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 PQBP1O60828 265 aaKnown RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 CDKL5O76039 1030 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 PARP1P09874 1014 aaKnown RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 PDHBP11177 359 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 TAL1P17542 331 aaPredicted RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 GNAQP50148 359 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 KLRC3Q07444 240 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 ASPRV1Q53RT3 343 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 SLFN13Q68D06 897 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 REPS2Q8NFH8 660 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 MYLIPQ8WY64 445 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 GMCL1Q96IK5 515 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 TEX13BQ9BXU2 312 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 TTYH1Q9H313 450 aaPredicted RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 NCOA5Q9HCD5 579 aaKnown RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 TMEM39AQ9NV64 488 aa18.45■□□□□ 0.54
IFT20-201ENST00000322326 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.45■□□□□ 0.54
IFT20-201ENST00000322326 DCDC2CA8MYV0 355 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 SNHG28P0DPA3 235 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 FOSL2P15408 326 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 ITGB8P26012 769 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 SLC1A4P43007 532 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 FPGSQ05932 587 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 GPATCH4Q5T3I0 446 aaKnown RBP18.44■□□□□ 0.54
IFT20-201ENST00000322326 DDX11Q96FC9 970 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 INTS4Q96HW7 963 aaKnown RBP18.44■□□□□ 0.54
IFT20-201ENST00000322326 SLF1Q9BQI6 1058 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 LZTS2Q9BRK4 669 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
IFT20-201ENST00000322326 STARD7Q9NQZ5 370 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 FAM184BQ9ULE4 1060 aa18.44■□□□□ 0.54
IFT20-201ENST00000322326 ISY1Q9ULR0 285 aaKnown RBP18.44■□□□□ 0.54
IFT20-201ENST00000322326 MOXD2PA6NHM9 499 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 ADAMTS4O75173 837 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 NDUFB10O96000 172 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 CDC27P30260 824 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 SNRNP48Q6IEG0 339 aaKnown RBP18.43■□□□□ 0.54
IFT20-201ENST00000322326 ANKRD33Q7Z3H0 272 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 TOX2Q96NM4 488 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 CTDP1Q9Y5B0 961 aaPredicted RBP18.43■□□□□ 0.54
IFT20-201ENST00000322326 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
IFT20-201ENST00000322326 BMP3P12645 472 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 ADD1P35611 737 aaKnown RBP18.42■□□□□ 0.54
IFT20-201ENST00000322326 ACLYP53396 1101 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 ZNF543Q08ER8 600 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 TMTC3Q6ZXV5 915 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 PRPF38AQ8NAV1 312 aaKnown RBP18.42■□□□□ 0.54
IFT20-201ENST00000322326 LENG1Q96BZ8 264 aaPredicted RBP18.42■□□□□ 0.54
IFT20-201ENST00000322326 MAD2L2Q9UI95 211 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
IFT20-201ENST00000322326 SYNRGQ9UMZ2 1314 aa18.42■□□□□ 0.54
IFT20-201ENST00000322326 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
IFT20-201ENST00000322326 KLRF2D3W0D1 207 aa18.41■□□□□ 0.54
IFT20-201ENST00000322326 EPHB4P54760 987 aa18.41■□□□□ 0.54
IFT20-201ENST00000322326 FAAP100Q0VG06 881 aa18.41■□□□□ 0.54
IFT20-201ENST00000322326 MAMDC4Q6UXC1 1216 aa18.41■□□□□ 0.54
IFT20-201ENST00000322326 NUP88Q99567 741 aaPredicted RBP18.41■□□□□ 0.54
IFT20-201ENST00000322326 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
IFT20-201ENST00000322326 FAM217BQ9NTX9 383 aaPredicted RBP18.41■□□□□ 0.54
IFT20-201ENST00000322326 SMC3Q9UQE7 1217 aa18.41■□□□□ 0.54
IFT20-201ENST00000322326 FRMPD2Q68DX3 1309 aaPredicted RBP18.41■□□□□ 0.54
IFT20-201ENST00000322326 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.4■□□□□ 0.54
IFT20-201ENST00000322326 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms